RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NETO2Q8NC67 525 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 WDR36Q8NI36 951 aaKnown RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 ASB12Q8WXK4 309 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 GRAMD1AQ96CP6 724 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 LIN37Q96GY3 246 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 FEM1CQ96JP0 617 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 CFAP57Q96MR6 1250 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 IL12RB2Q99665 862 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 ATP13A1Q9HD20 1204 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 HECAQ9UBI9 543 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 CREBBPQ92793 2442 aa9.33□□□□□ -0.92
CHMP4A-205ENST00000531158 BICDL2A1A5D9 508 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 GOLGA6L9A6NEM1 432 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 D6RAR5 112 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM72CH0Y354 149 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 TSPAN6O43657 245 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 GNA14O95837 355 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 UGT2B4P06133 528 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ATXN8OSP0DMR3 200 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ATP1A3P13637 1013 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 SLC5A2P31639 672 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 UGT1A5P35504 534 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 RECQLP46063 649 aaPredicted RBP9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 GABRB2P47870 512 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 DNA2P51530 1060 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ZNF805Q5CZA5 627 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ATXN7L2Q5T6C5 722 aaPredicted RBP9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM72AQ5TYM5 149 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM72DQ6L9T8 149 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 RETSATQ6NUM9 610 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ZNF783Q6ZMS7 281 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 TMPRSS9Q7Z410 1059 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 VPS36Q86VN1 386 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 NLRP14Q86W24 1093 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM72BQ86X60 149 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM131BQ86XD5 332 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM71AQ8IYT1 594 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 DENND6BQ8NEG7 585 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 KIF18AQ8NI77 898 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 PCDH19Q8TAB3 1148 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ARHGEF2Q92974 986 aaKnown RBP9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 CCDC74AQ96AQ1 378 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 TBATAQ96M53 351 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 CCNL2Q96S94 520 aaPredicted RBP9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 FOXP3Q9BZS1 431 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 ZYG11BQ9C0D3 744 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 NCKIPSDQ9NZQ3 722 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 SPASTQ9UBP0 616 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 IPO11Q9UI26 975 aaKnown RBP9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 TMEM59LQ9UK28 342 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 PADI4Q9UM07 663 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 PCDHGA7Q9Y5G6 932 aa9.32□□□□□ -0.92
CHMP4A-205ENST00000531158 USP27XA6NNY8 438 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 KRIT1O00522 736 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 PLD2O14939 933 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 MMP20O60882 483 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 EIF4A3P38919 411 aaKnown RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 PPP1R2P41236 205 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 THOP1P52888 689 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 PTK2Q05397 1052 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 TBX2Q13207 712 aaPredicted RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 SGCGQ13326 291 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 SPIDRQ14159 915 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 IRF4Q15306 451 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 ALG11Q2TAA5 492 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 FAM102AQ5T9C2 384 aaPredicted RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 E4F1Q66K89 784 aaPredicted RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 LRRC31Q6UY01 552 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 MACC1Q6ZN28 852 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 ZDHHC17Q8IUH5 632 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 ARL14Q8N4G2 192 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 EMC1Q8N766 993 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 OR2AP1Q8NGE2 309 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 BTN2A2Q8WVV5 523 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 EXTL1Q92935 676 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 NAT6Q93015 286 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 RAB7BQ96AH8 199 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 ISG20Q96AZ6 181 aaKnown RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 KLHL32Q96NJ5 620 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 HAPLN3Q96S86 360 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 EPAS1Q99814 870 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 KLC2Q9H0B6 622 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 NOL6Q9H6R4 1146 aaKnown RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 SYNDIG1Q9H7V2 258 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 EPB41L5Q9HCM4 733 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 STARD5Q9NSY2 213 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 EVA1BQ9NVM1 165 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 RRN3Q9NYV6 651 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 PPARGC1AQ9UBK2 798 aaKnown RBP9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 DNAJC12Q9UKB3 198 aa9.31□□□□□ -0.92
CHMP4A-205ENST00000531158 ACSL6Q9UKU0 697 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms