RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 COMMD8Q9NX08 183 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 DTLQ9NZJ0 730 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 USTQ9Y2C2 406 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 RWDD3Q9Y3V2 267 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 AUP1Q9Y679 476 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SLITRK5O94991 958 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 HSPA4LO95757 839 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 CCNE2O96020 404 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 GOT2P00505 430 aaKnown RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SPNP16150 400 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 RPS9P46781 194 aaKnown RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 GJA9P57773 515 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SLC13A2Q13183 592 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 C2CD6Q53TS8 623 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PAGE2BQ5JRK9 111 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 STEAP3Q658P3 488 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SEL1L3Q68CR1 1132 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PELI3Q8N2H9 469 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 DCLK2Q8N568 766 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ANKRD53Q8N9V6 530 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 FAM156AQ8NDB6 213 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 FBXL13Q8NEE6 735 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 OR5H6Q8NGV6 325 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 HTRA1Q92743 480 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PPWD1Q96BP3 646 aaKnown RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 TMEM80Q96HE8 168 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 CEP170P1Q96L14 293 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ILKAPQ9H0C8 392 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 DPEP3Q9H4B8 488 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ACAD9Q9H845 621 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ADA2Q9NZK5 511 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PAK5Q9P286 719 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SLCO3A1Q9UIG8 710 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 OSGIN1Q9UJX0 560 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ANAPC2Q9UJX6 822 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 A0A0X1KG70 313 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 H0Y858 1186 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PRKACAP17612 351 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SLC26A3P40879 764 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 SLC9A3P48764 834 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 MRPS15P82914 257 aaKnown RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 INCA1Q0VD86 236 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 TOP3AQ13472 1001 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ACOX1Q15067 660 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PDK2Q15119 407 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 LCN8Q6JVE9 175 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PNCKQ6P2M8 343 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 MAPKAPK5Q8IW41 473 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ABRAQ8N0Z2 381 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 CANT1Q8WVQ1 401 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 POMGNT1Q8WZA1 660 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PIK3R3Q92569 461 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 C17orf62Q9BQA9 187 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 WDR6Q9NNW5 1121 aaKnown RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 TLR9Q9NR96 1032 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 ADPRHL2Q9NX46 363 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 CACNA2D2Q9NY47 1150 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 RBAKQ9NYW8 714 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 RIPK3Q9Y572 518 aa8.19□□□□□ -1.1
CSDE1-214ENST00000530886 COPG1Q9Y678 874 aaKnown RBP8.19□□□□□ -1.1
CSDE1-214ENST00000530886 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 LOC102724428A0A0B4J2F2 783 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 PABPN1LA6NDY0 278 aaKnown RBP8.18□□□□□ -1.1
CSDE1-214ENST00000530886 KPNA7A9QM74 516 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 G3V2L1 256 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 TPP1O14773 563 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 GRID2O43424 1007 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 ALBP02768 609 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 YES1P07947 543 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 MYL3P08590 195 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 HTR1AP08908 422 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 ADORA2AP29274 412 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 RPL14P50914 215 aaKnown RBP8.18□□□□□ -1.1
CSDE1-214ENST00000530886 MAPK10P53779 464 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 ATXN3P54252 364 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-214ENST00000530886 GP2P55259 537 aaKnown RBP8.18□□□□□ -1.1
CSDE1-214ENST00000530886 SIK1P57059 783 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 GTF2BQ00403 316 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 INPP5AQ14642 412 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 XKRXQ6PP77 449 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 HORMAD1Q86X24 394 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 YIPF6Q96EC8 236 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 ACCSQ96QU6 501 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 NPAS2Q99743 824 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 EBNA1BP2Q99848 306 aaKnown RBP8.18□□□□□ -1.1
CSDE1-214ENST00000530886 IL22Q9GZX6 179 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 HPS4Q9NQG7 708 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 SERPINA10Q9UK55 444 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 GOLGA8IPA6NC78 632 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 H0YIN7 160 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 CTDSP2O14595 271 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 MFN2O95140 757 aa8.18□□□□□ -1.1
CSDE1-214ENST00000530886 DLGAP3O95886 979 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms