RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 LRRC73Q5JTD7 316 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 ERAP2Q6P179 960 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 ABI3BPQ7Z7G0 1075 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 PQLC3Q8N755 202 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 PAF1Q8N7H5 531 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 DENND6BQ8NEG7 585 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
CCS-205ENST00000530384 ZNF830Q96NB3 372 aaPredicted RBP17.23■□□□□ 0.35
CCS-205ENST00000530384 LENG8Q96PV6 779 aaPredicted RBP17.23■□□□□ 0.35
CCS-205ENST00000530384 RNF157Q96PX1 679 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 NUDCD1Q96RS6 583 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 MGME1Q9BQP7 344 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 HAUS2Q9NVX0 235 aa17.23■□□□□ 0.35
CCS-205ENST00000530384 A0A1W2PQ67 120 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 TM7SF2O76062 418 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 KRT1P04264 644 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 CR2P20023 1033 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 CCNCP24863 283 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 GRK6P43250 576 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 RXRGP48443 463 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 POLR2LP62875 67 aaKnown RBP17.22■□□□□ 0.35
CCS-205ENST00000530384 TRIP6Q15654 476 aaKnown RBP17.22■□□□□ 0.35
CCS-205ENST00000530384 TMEM52BQ4KMG9 183 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 GCNT7Q6ZNI0 430 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 SPATS2Q86XZ4 545 aaKnown RBP17.22■□□□□ 0.35
CCS-205ENST00000530384 DCP2Q8IU60 420 aaKnown RBP17.22■□□□□ 0.35
CCS-205ENST00000530384 RHBDD1Q8TEB9 315 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 FATE1Q969F0 183 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 ECHDC3Q96DC8 303 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 CALR3Q96L12 384 aaKnown RBP17.22■□□□□ 0.35
CCS-205ENST00000530384 CAMK1GQ96NX5 476 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 TSGA13Q96PP4 275 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 C1QTNF7Q9BXJ2 289 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 MAK16Q9BXY0 300 aaKnown RBP17.22■□□□□ 0.35
CCS-205ENST00000530384 PCDH12Q9NPG4 1184 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 SCUBE2Q9NQ36 999 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 PCOLCE2Q9UKZ9 415 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 NCOR2Q9Y618 2525 aa17.22■□□□□ 0.35
CCS-205ENST00000530384 C3orf70A6NLC5 250 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 GOLGA6L6A8MZA4 724 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 FPGTO14772 594 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 MATN3O15232 486 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 PSTPIP1O43586 416 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 MMP20O60882 483 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 CBFA2T3O75081 653 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 SOCS5O75159 536 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 TNNT1P13805 278 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 ZFXP17010 805 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 CLDN2P57739 230 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 SIM1P81133 766 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 IL9RQ01113 521 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 PRAMEF14Q5SWL7 426 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 C11orf63Q6NUN7 778 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 KYAT3Q6YP21 454 aaKnown RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 PTAR1Q7Z6K3 402 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 PGBD5Q8N414 524 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 TEX26Q8N6G2 289 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 OR13H1Q8NG92 308 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 KLF6Q99612 283 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 CDC6Q99741 560 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 BAG1Q99933 345 aaPredicted RBP17.21■□□□□ 0.35
CCS-205ENST00000530384 AMACRQ9UHK6 382 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 ATP8A1Q9Y2Q0 1164 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 ALG6Q9Y672 507 aa17.21■□□□□ 0.35
CCS-205ENST00000530384 LRRK1Q38SD2 2015 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 APOL1O14791 398 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 RAD51BO15315 384 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 NEBLO76041 1014 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 ITGAVP06756 1048 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 ITIH2P19823 946 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 NFKBIAP25963 317 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 EPHA8P29322 1005 aaPredicted RBP17.2■□□□□ 0.34
CCS-205ENST00000530384 PMLP29590 882 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 MMP12P39900 470 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 RABIFP47224 123 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 GBE1Q04446 702 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 SHBQ15464 509 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 Q6ZSR6 202 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 GLRX5Q86SX6 157 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 ZSWIM9Q86XI8 627 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 PLD5Q8N7P1 536 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 BAHD1Q8TBE0 780 aaPredicted RBP17.2■□□□□ 0.34
CCS-205ENST00000530384 SAP25Q8TEE9 199 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 SPOCK2Q92563 424 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 MAML1Q92585 1016 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 HDAC11Q96DB2 347 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 BMFQ96LC9 184 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 WRAP53Q9BUR4 548 aaKnown RBP17.2■□□□□ 0.34
CCS-205ENST00000530384 POLR1EQ9GZS1 481 aaKnown RBP17.2■□□□□ 0.34
CCS-205ENST00000530384 NT5MQ9NPB1 228 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 DTLQ9NZJ0 730 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 HYOU1Q9Y4L1 999 aa17.2■□□□□ 0.34
CCS-205ENST00000530384 CFAP69A5D8W1 941 aa17.19■□□□□ 0.34
CCS-205ENST00000530384 POM121BA6NF01 834 aa17.19■□□□□ 0.34
CCS-205ENST00000530384 HTRA2O43464 458 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms