RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PAGE1O75459 146 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 PLEKP08567 350 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 C6P13671 934 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 HNRNPA2B1P22626 353 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 MCM3P25205 808 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 CHRNA3P32297 505 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 JAM2P57087 298 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 GCNT1Q02742 428 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 VAC14Q08AM6 782 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 SRSF6Q13247 344 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 PDCLQ13371 301 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 BRD3Q15059 726 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 IFI16Q16666 785 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 CDKN3Q16667 212 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 C5orf22Q49AR2 442 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 TEX35Q5T0J7 233 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 FBXO38Q6PIJ6 1188 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 TMCO3Q6UWJ1 677 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 LINGO4Q6UY18 593 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 Q6ZSR6 202 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 IRF2BP2Q7Z5L9 587 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 LRRN4CLQ8ND94 238 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF548Q8NEK5 533 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM174AQ8TBP5 190 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 GRIN3AQ8TCU5 1115 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 STK32AQ8WU08 396 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 CPXM1Q96SM3 734 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 KLF6Q99612 283 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 TNKS2Q9H2K2 1166 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 TCEAL2Q9H3H9 227 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM204AQ9H8W3 233 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 DDIT4Q9NX09 232 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 DNAJC28Q9NX36 388 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 RNF14Q9UBS8 474 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 TRIM10Q9UDY6 481 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 VPS51Q9UID3 782 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 GGT7Q9UJ14 662 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 INTUQ9ULD6 942 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 HS3ST2Q9Y278 367 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 TBC1D30Q9Y2I9 924 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 ACTL7AQ9Y615 435 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 WASF2Q9Y6W5 498 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 LRRK1Q38SD2 2015 aa8.7□□□□□ -1.02
TGFBR3-208ENST00000529608 RP1P56715 2156 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 MACROD2A1Z1Q3 448 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 CDRT15L2A8MXV6 281 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 K7ENP7 123 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 SART1O43290 800 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 ENDOD1O94919 500 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 PCDH8O95206 1070 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 PAK4O96013 591 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 CSF2P04141 144 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 GP1BAP07359 652 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 KRT5P13647 590 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 TCP1P17987 556 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 CCR1P32246 355 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 ACADSBP45954 432 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 EIF2B5Q13144 721 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 CLN3Q13286 438 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 AGERQ15109 404 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 DEFB133Q30KQ1 61 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 RABGAP1LQ5R372 815 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 BROXQ5VW32 411 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 NEK5Q6P3R8 708 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 INO80CQ6PI98 192 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 IGF2-ASQ6U949 168 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 DPY19L3Q6ZPD9 716 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM183BPQ6ZVS7 135 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 ERN2Q76MJ5 926 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 EFL1Q7Z2Z2 1120 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 PTAR1Q7Z6K3 402 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 PASD1Q8IV76 773 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 RBFAQ8N0V3 343 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 LSMEM2Q8N112 164 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 EXD3Q8N9H8 876 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 ATP11CQ8NB49 1132 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 MSANTD4Q8NCY6 345 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 TMIEQ8NEW7 156 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 OR7D4Q8NG98 312 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 MAPK15Q8TD08 544 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 SLC46A1Q96NT5 459 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 DPH1Q9BZG8 443 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 INTS2Q9H0H0 1204 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 SIK2Q9H0K1 926 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 SIX2Q9NPC8 291 aa8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 AJAP1Q9UKB5 411 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-208ENST00000529608 CHD5Q8TDI0 1954 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 SPTY2D1-AS1A0A0U1RR47 76 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 FAM170AA1A519 330 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CPED1A4D0V7 1026 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 EME2A4GXA9 379 aaPredicted RBP8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 CCDC151A5D8V7 595 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 A6NNZ2 444 aa8.68□□□□□ -1.02
TGFBR3-208ENST00000529608 THAP12O43422 761 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms