RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CRNNQ9UBG3 495 aaPredicted RBP3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 ODF2LQ9ULJ1 636 aa3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 TMCC3Q9ULS5 477 aa3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 LIPT1Q9Y234 373 aa3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 KLHL20Q9Y2M5 609 aa3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 AAR2Q9Y312 384 aaKnown RBP3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 CMAHPQ9Y471 501 aa3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 HEMK1Q9Y5R4 338 aaPredicted RBP3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 SIRT4Q9Y6E7 314 aaPredicted RBP3.66□□□□□ -1.82
AMBRA1-208ENST00000529558 GPR75-ASB3A0A0A6YYF3 556 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 A0A1W2PR77 199 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 NPEPPSL1A6NEC2 478 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TCAF2A6NFQ2 919 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 OR6C76A6NM76 312 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CLIC1O00299 241 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 YY2O15391 372 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 PRPF4O43172 522 aaKnown RBP eCLIP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 SPRY1O43609 319 aaPredicted RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 KINO60870 393 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 KERAO60938 352 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ZC3H11AO75152 810 aaKnown RBP eCLIP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 B3GALNT1O75752 331 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 DDAH2O95865 285 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 IL1AP01583 271 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 APEHP13798 732 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 IL7RP16871 459 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ZNF182P17025 639 aaPredicted RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 PTPN2P17706 415 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TACR2P21452 398 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 FPR3P25089 353 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 DDX6P26196 483 aaKnown RBP eCLIP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 PCSK6P29122 969 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 HIBADHP31937 336 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 MC5RP33032 325 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CYP2C18P33260 490 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 AMPHP49418 695 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 VPS41P49754 854 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 RAB28P51157 221 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CLCN3P51790 818 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CLDN2P57739 230 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 SCN1BQ07699 218 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ACSM2AQ08AH3 577 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ZNF273Q14593 569 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 MFSD13AQ14CX5 517 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ME3Q16798 604 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 MEP1BQ16820 701 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 LETM2Q2VYF4 491 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 C2orf76Q3KRA6 126 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ZRANB3Q5FWF4 1079 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 RNASE12Q5GAN4 147 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 RABL3Q5HYI8 236 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TMEM63BQ5T3F8 832 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TMEM268Q5VZI3 342 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ACSM2BQ68CK6 577 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 MSANTD1Q6ZTZ1 278 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 OTOAQ7RTW8 1153 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 NUP54Q7Z3B4 507 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CAMKMTQ7Z624 323 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TDRPQ86YL5 185 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 KLBQ86Z14 1044 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TMEM151BQ8IW70 566 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TUSC5Q8IXB3 177 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 C16orf71Q8IYS4 520 aaPredicted RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 RNF168Q8IYW5 571 aaPredicted RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 SIX6OS1Q8N1H7 587 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 GUF1Q8N442 669 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ARL6IP6Q8N6S5 226 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 LILRB1Q8NHL6 650 aaPredicted RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CELF1Q92879 486 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 HDAC11Q96DB2 347 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 PBKQ96KB5 322 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 LINC00615Q96LM1 132 aaPredicted RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 TEFMQ96QE5 360 aaKnown RBP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 FRG2BQ96QU4 278 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 ZNF347Q96SE7 839 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 NUP85Q9BW27 656 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CD320Q9NPF0 282 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 NRIP3Q9NQ35 241 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 SERTAD4Q9NUC0 356 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 CTNNAL1Q9UBT7 734 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 MOSPD1Q9UJG1 213 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 FAM96BQ9Y3D0 163 aa3.65□□□□□ -1.83
AMBRA1-208ENST00000529558 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 ARHGEF37A1IGU5 675 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 FAM157AC9JC47 383 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 SPDEFO95238 335 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 SIX3O95343 332 aaPredicted RBP3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 MT-CYBP00156 380 aaPredicted RBP3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 IGHDP01880 384 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 CHRM2P08172 466 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 NR2F6P10588 404 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 ACTN1P12814 892 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 MMP9P14780 707 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 ENGP17813 658 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 ITGAXP20702 1163 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 CASTP20810 708 aaKnown RBP3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 COMTP21964 271 aa3.64□□□□□ -1.83
AMBRA1-208ENST00000529558 SP100P23497 879 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms