RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 NEUROD6Q96NK8 337 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 PIGSQ96S52 555 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 FAM167BQ9BTA0 163 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 BRD8Q9H0E9 1235 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 MTMR4Q9NYA4 1195 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 KIAA0100Q14667 2235 aaKnown RBP5.17□□□□□ -1.58
CSDE1-212ENST00000529046 MYH13Q9UKX3 1938 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 SAC3D1A6NKF1 404 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 PLAUP00749 431 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 SLC3A2P08195 630 aaKnown RBP5.17□□□□□ -1.58
CSDE1-212ENST00000529046 TACR3P29371 465 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 VPS41P49754 854 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 ADPRHP54922 357 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 BACE1P56817 501 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 SPP2Q13103 211 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 RPS6KA2Q15349 733 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 CPXCR1Q8N123 301 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 ENDOVQ8N8Q3 282 aaKnown RBP5.17□□□□□ -1.58
CSDE1-212ENST00000529046 ZNF347Q96SE7 839 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 FAM118BQ9BPY3 351 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
CSDE1-212ENST00000529046 RAI14Q9P0K7 980 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 KLHL13Q9P2N7 655 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 PCDHA10Q9Y5I2 948 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 HEMK1Q9Y5R4 338 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-212ENST00000529046 EMSYQ7Z589 1322 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 MYH2Q9UKX2 1941 aa5.17□□□□□ -1.58
CSDE1-212ENST00000529046 AGAP5A6NIR3 686 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 H0YGN5 161 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 CNOT3O75175 753 aaKnown RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 MOSPD3O75425 235 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 TOP3BO95985 862 aaKnown RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 PEPDP12955 493 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 MAPK4P31152 587 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 AARSP49588 968 aaKnown RBP eCLIP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 ZNF268Q14587 947 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 HSP90AB4PQ58FF6 505 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 TTC39AQ5SRH9 613 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 MAP3K21Q5TCX8 1036 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 NAA16Q6N069 864 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 KIAA1324Q6UXG2 1013 aaKnown RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 BBS12Q6ZW61 710 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 SYT13Q7L8C5 426 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 MDGA2Q7Z553 956 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 RHPN2Q8IUC4 686 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 ERC1Q8IUD2 1116 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 TEX11Q8IYF3 940 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 ANKRD13CQ8N6S4 541 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 USP38Q8NB14 1042 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 GPRC5AQ8NFJ5 357 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 OSR1Q8TAX0 266 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 USP6NLQ92738 828 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 C12orf42Q96LP6 360 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 SCLT1Q96NL6 688 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 FCRL4Q96PJ5 515 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 TWNKQ96RR1 684 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 PYM1Q9BRP8 204 aaKnown RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 HERC2P3Q9BVR0 1158 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 PRDM16Q9HAZ2 1276 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 IL21RQ9HBE5 538 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 TUBA8Q9NY65 449 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-212ENST00000529046 DERAQ9Y315 318 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 FLT1P17948 1338 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 PHIPQ8WWQ0 1821 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 DOCK2Q92608 1830 aa5.16□□□□□ -1.58
CSDE1-212ENST00000529046 DOCK1Q14185 1865 aa5.15□□□□□ -1.58
CSDE1-212ENST00000529046 MCIDASD6RGH6 385 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 E5RJQ4 531 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 INPPL1O15357 1258 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 SURF6O75683 361 aaKnown RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 BMP15O95972 392 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 HOXC6P09630 235 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ALDOCP09972 364 aaKnown RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 CKMT1AP12532 417 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ACP5P13686 325 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PRPH2P23942 346 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ATP5F1P24539 256 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PNPLA4P41247 253 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PCP4P48539 62 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PAPOLAP51003 745 aaKnown RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 HMGCS2P54868 508 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 SHC2P98077 582 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 B4GALNT1Q00973 533 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 SRSF1Q07955 248 aaKnown RBP eCLIP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 THOC5Q13769 683 aaKnown RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 EARS2Q5JPH6 523 aaKnown RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ZNF484Q5JVG2 852 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ANO7Q6IWH7 933 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 CPOQ8IVL8 374 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 RPAP2Q8IXW5 612 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 SMAP1Q8IYB5 467 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 TMEM57Q8N5G2 664 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ZNF366Q8N895 744 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 PPM1EQ8WY54 764 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 RUBCNQ92622 972 aa5.15□□□□□ -1.59
CSDE1-212ENST00000529046 FRAT1Q92837 279 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-212ENST00000529046 ARRDC3Q96B67 414 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms