RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 ZNF548Q8NEK5 533 aaPredicted RBP10.88□□□□□ -0.67
SIPA1-204ENST00000528699 HCAR2Q8TDS4 363 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 CENPTQ96BT3 561 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 CELF6Q96J87 481 aaKnown RBP10.88□□□□□ -0.67
SIPA1-204ENST00000528699 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 NCAPGQ9BPX3 1015 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 SLC39A8Q9C0K1 460 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 DHX35Q9H5Z1 703 aaKnown RBP10.88□□□□□ -0.67
SIPA1-204ENST00000528699 ABHD10Q9NUJ1 306 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 DNAJC28Q9NX36 388 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 DONSONQ9NYP3 566 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 NLGN3Q9NZ94 848 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 KLF15Q9UIH9 416 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 RAXQ9Y2V3 346 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 U3KQA8 63 aa10.88□□□□□ -0.67
SIPA1-204ENST00000528699 URB1O60287 2271 aaKnown RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 SCAMP1O15126 338 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 PRPSAP2O60256 369 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 MMP20O60882 483 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 PIGNO95427 931 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 CKMT1AP12532 417 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 JUPP14923 745 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 TIMP2P16035 220 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 ERCC2P18074 760 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 ITIH2P19823 946 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 IGFALSP35858 605 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 RGRP47804 291 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 HCAR3P49019 387 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 PAPOLAP51003 745 aaKnown RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 SUOXP51687 545 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 HNRNPKP61978 463 aaKnown RBP eCLIP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 EIF2B5Q13144 721 aaKnown RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 TARDBPQ13148 414 aaKnown RBP eCLIP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 PIGHQ14442 188 aaPredicted RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 TMEM52BQ4KMG9 183 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 TTC7BQ86TV6 843 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 DCBLD1Q8N8Z6 715 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 FAM181AQ8N9Y4 354 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 TP53I13Q8NBR0 393 aaPredicted RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 TEKT4Q8WW24 435 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 NXPE2Q96DL1 559 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 CHP1Q99653 195 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 PACSIN1Q9BY11 444 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 ANAPC7Q9UJX3 599 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 PNMA8BQ9ULN7 279 aaPredicted RBP10.87□□□□□ -0.67
SIPA1-204ENST00000528699 LHX6Q9UPM6 363 aa10.87□□□□□ -0.67
SIPA1-204ENST00000528699 ADAMTS20P59510 1910 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 NEMP2A6NFY4 417 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ARHGAP42A6NI28 874 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 H3BM21 787 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 K7ESM1 405 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 TOR1BO14657 336 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 BUB1BO60566 1050 aaPredicted RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 NEBLO76041 1014 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 TM7SF2O76062 418 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 GP1BAP07359 652 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 RARAP10276 462 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ALPPL2P10696 532 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 CSNK1DP48730 415 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ZNF135P52742 658 aaPredicted RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ADKP55263 362 aaKnown RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 YPEL5P62699 121 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 DAB2P98082 770 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ELP6Q0PNE2 266 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 GRM3Q14832 879 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 UGP2Q16851 508 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 SMTNL2Q2TAL5 461 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 HS1BP3Q53T59 392 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 PPP6R3Q5H9R7 873 aaPredicted RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ARHGAP36Q6ZRI8 547 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ZSWIM9Q86XI8 627 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 CPNE8Q86YQ8 564 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 TP53INP2Q8IXH6 220 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ZNF564Q8TBZ8 553 aaPredicted RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 FAM71BQ8TC56 605 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 CXorf40AQ8TE69 158 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 APOLD1Q96LR9 279 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ZNF641Q96N77 438 aaPredicted RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 TUBGCP5Q96RT8 1024 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 WRAP53Q9BUR4 548 aaKnown RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 DUSP23Q9BVJ7 150 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 NRSN2Q9GZP1 204 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 SUV39H2Q9H5I1 410 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 USP29Q9HBJ7 922 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 MBNL1Q9NR56 388 aaKnown RBP10.86□□□□□ -0.67
SIPA1-204ENST00000528699 ETNK2Q9NVF9 386 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 IP6K2Q9UHH9 426 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 CSNK1G3Q9Y6M4 447 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 LOC400499M0QZD8 3231 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 MYLKQ15746 1914 aa10.86□□□□□ -0.67
SIPA1-204ENST00000528699 COL27A1Q8IZC6 1860 aaPredicted RBP10.85□□□□□ -0.67
SIPA1-204ENST00000528699 A0A087WV48 116 aa10.85□□□□□ -0.67
SIPA1-204ENST00000528699 RIOK3O14730 519 aaKnown RBP10.85□□□□□ -0.67
SIPA1-204ENST00000528699 MUSKO15146 869 aa10.85□□□□□ -0.67
SIPA1-204ENST00000528699 DAPK3O43293 454 aa10.85□□□□□ -0.67
SIPA1-204ENST00000528699 AQP9O43315 295 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms