RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 EDEM3Q9BZQ6 932 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 STRADBQ9C0K7 418 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 EPB41L5Q9HCM4 733 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 WDR70Q9NW82 654 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 SIRPGQ9P1W8 387 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 DKK3Q9UBP4 350 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 RABGEF1Q9UJ41 708 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 NEU3Q9UQ49 428 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 NAV2Q8IVL1 2488 aa16.29■□□□□ 0.2
PTPRU-210ENST00000527027 KIF26BQ2KJY2 2108 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 AHCTF1Q8WYP5 2266 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 TMCC1O94876 653 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 KRT10P13645 584 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 PRKCSHP14314 528 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-210ENST00000527027 SDC4P31431 198 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 INHBCP55103 352 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 LRRC14Q15048 493 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 IRF4Q15306 451 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 TMEM52BQ4KMG9 183 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 INO80DQ53TQ3 878 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-210ENST00000527027 XKR5Q6UX68 686 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 STRADAQ7RTN6 431 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 GKN2Q86XP6 184 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 FAM114A1Q8IWE2 563 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 KYQ8NBH2 561 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 OR6C4Q8NGE1 309 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 PCDH19Q8TAB3 1148 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 TSACCQ96A04 125 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-210ENST00000527027 CCDC74AQ96AQ1 378 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 ACSL6Q9UKU0 697 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 GPR34Q9UPC5 381 aa16.28■□□□□ 0.2
PTPRU-210ENST00000527027 A0A1W2PQM1 296 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 D6RAR5 112 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 NOBOXO60393 691 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 RASGRP1O95267 797 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 IGSF6O95976 241 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 UCHL3P15374 230 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 MMP8P22894 467 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 XPAP23025 273 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-210ENST00000527027 HTR1BP28222 390 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 SUOXP51687 545 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 RHOAP61586 193 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 ELP6Q0PNE2 266 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 ALG11Q2TAA5 492 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 WSCD2Q2TBF2 565 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 USP53Q70EK8 1073 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 RD3Q7Z3Z2 195 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 JAMLQ86YT9 394 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 HCAR2Q8TDS4 363 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 EPS8L1Q8TE68 723 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 CENPIQ92674 756 aaPredicted RBP16.27■□□□□ 0.2
PTPRU-210ENST00000527027 TMEM74Q96NL1 305 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 APOOQ9BUR5 198 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 CPEB1Q9BZB8 566 aaKnown RBP16.27■□□□□ 0.2
PTPRU-210ENST00000527027 FOXP3Q9BZS1 431 aa16.27■□□□□ 0.2
PTPRU-210ENST00000527027 C2CD4BA6NLJ0 364 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 CYSRT1A8MQ03 144 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 NVLO15381 856 aaKnown RBP16.26■□□□□ 0.19
PTPRU-210ENST00000527027 RPLP0P05388 317 aaKnown RBP16.26■□□□□ 0.19
PTPRU-210ENST00000527027 CCKBRP32239 447 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 PTPN9P43378 593 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 SRP54P61011 504 aaKnown RBP16.26■□□□□ 0.19
PTPRU-210ENST00000527027 INPP5AQ14642 412 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 NFATC4Q14934 902 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 TCEA2Q15560 299 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 TGIF1Q15583 401 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 LINC00303Q3SY05 128 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 ENPP7Q6UWV6 458 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 PRICKLE2Q7Z3G6 844 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 PHLDB2Q86SQ0 1253 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 ZNF677Q86XU0 584 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 CCDC185Q8N715 623 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 NETO2Q8NC67 525 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 ATL2Q8NHH9 583 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 JOSD2Q8TAC2 188 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 GPT2Q8TD30 523 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 SGF29Q96ES7 293 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 FAM117AQ9C073 453 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 LRRN3Q9H3W5 708 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 NOL6Q9H6R4 1146 aaKnown RBP16.26■□□□□ 0.19
PTPRU-210ENST00000527027 COQ6Q9Y2Z9 468 aa16.26■□□□□ 0.19
PTPRU-210ENST00000527027 HEMK1Q9Y5R4 338 aaPredicted RBP16.26■□□□□ 0.19
PTPRU-210ENST00000527027 F8VZ95 297 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 PES1O00541 588 aaKnown RBP16.25■□□□□ 0.19
PTPRU-210ENST00000527027 ARHGAP6O43182 974 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 TNFP01375 233 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 CYP1A1P04798 512 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-210ENST00000527027 JMJD7P0C870 316 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 HGFP14210 728 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 CSRP3P50461 194 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 HDAC4P56524 1084 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 YBEYP58557 167 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-210ENST00000527027 NFATC3Q12968 1075 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 AGERQ15109 404 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 GPR156Q8NFN8 814 aa16.25■□□□□ 0.19
PTPRU-210ENST00000527027 FAM172AQ8WUF8 416 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms