RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CRYBB1P53674 252 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 NLRP11P59045 1033 aaKnown RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 RPS16P62249 146 aaKnown RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 TLE2Q04725 743 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 NCBP1Q09161 790 aaKnown RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 LAMTOR4Q0VGL1 99 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 STK4Q13043 487 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 COASYQ13057 564 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 MAPK7Q13164 816 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 DMP1Q13316 513 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 DRP2Q13474 957 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 MORC3Q14149 939 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 HLTFQ14527 1009 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP48-211ENST00000526044 ZSCAN23Q3MJ62 389 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 INO80DQ53TQ3 878 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 ANKRD16Q6P6B7 361 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ZDHHC24Q6UX98 284 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 RBM43Q6ZSC3 357 aaKnown RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 STXBP4Q6ZWJ1 553 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ANKRD33Q7Z3H0 272 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 HAUS6Q7Z4H7 955 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 WDR53Q7Z5U6 358 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 RPAINQ86UA6 219 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SERINC5Q86VE9 423 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SFR1Q86XK3 245 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ZBTB8OSQ8IWT0 167 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 MYOCDQ8IZQ8 938 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 KRT78Q8N1N4 520 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 LINC01465Q8N7H1 131 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 MLKLQ8NB16 471 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 RNF149Q8NC42 400 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 C1orf131Q8NDD1 294 aaKnown RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 DEPTORQ8TB45 409 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 OSCP1Q8WVF1 389 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ABHD8Q96I13 439 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 MSLNLQ96KJ4 702 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 NLRP4Q96MN2 994 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SCLT1Q96NL6 688 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 BBC3Q96PG8 261 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 GCOM2Q9BZD3 368 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 BTBD1Q9H0C5 482 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 FAM49AQ9H0Q0 323 aaPredicted RBP4.79□□□□□ -1.64
USP48-211ENST00000526044 OLFML3Q9NRN5 406 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 ANO10Q9NW15 660 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 TAGLN3Q9UI15 199 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 GINS2Q9Y248 185 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 SCINQ9Y6U3 715 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
USP48-211ENST00000526044 PHLPP2Q6ZVD8 1323 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 A0A087WZ62 844 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 SYCE3A1L190 88 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 DENND3A2RUS2 1198 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 INO80B-WBP1J3KQ70 363 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 EIF3DO15371 548 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP48-211ENST00000526044 CCP110O43303 1012 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 PQBP1O60828 265 aaKnown RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 C1QL1O75973 258 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 GCNT3O95395 438 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CHRNA1P02708 482 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 FESP07332 822 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CCDC192P0DO97 292 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 JUPP14923 745 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 ITPKBP27987 946 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CYP2C18P33260 490 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 PPP1R2P41236 205 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 PRCPP42785 496 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 GPC3P51654 580 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CLCN2P51788 898 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 PTENP60484 403 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 MRPS6P82932 125 aaKnown RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 GTF2BQ00403 316 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 BFSP2Q13515 415 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 STIM1Q13586 685 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 ALCAMQ13740 583 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CAPSQ13938 189 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 CCNIQ14094 377 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 MAPK6Q16659 721 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 TRIM60Q495X7 471 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 ZC2HC1CQ53FD0 456 aaPredicted RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 L1TD1Q5T7N2 865 aaKnown RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 RINLQ6ZS11 566 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 ZNF410Q86VK4 478 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 IZUMO1Q8IYV9 350 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 SYCP3Q8IZU3 236 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 GUF1Q8N442 669 aaKnown RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 PAF1Q8N7H5 531 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 DHTKD1Q96HY7 919 aaPredicted RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 ZNF668Q96K58 619 aaPredicted RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 ACCSQ96QU6 501 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 NFKBIZQ9BYH8 718 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 NAT10Q9H0A0 1025 aaKnown RBP4.78□□□□□ -1.64
USP48-211ENST00000526044 C2orf40Q9H1Z8 148 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 ST6GALNAC4Q9H4F1 302 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 TMEM206Q9H813 350 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 PTGFRNQ9P2B2 879 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 TBX20Q9UMR3 447 aa4.78□□□□□ -1.64
USP48-211ENST00000526044 EXOC7Q9UPT5 735 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms