RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 RABIFP47224 123 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 POLR2LP62875 67 aaKnown RBP17.68■□□□□ 0.42
NR1H3-228ENST00000525441 PAFAH1B3Q15102 231 aaKnown RBP17.68■□□□□ 0.42
NR1H3-228ENST00000525441 TCEAL1Q15170 157 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 SPA17Q15506 151 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 TMEM52BQ4KMG9 183 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 MARC1Q5VT66 337 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 Q6ZSR6 202 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 CCDC170Q8IYT3 715 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 PCDH19Q8TAB3 1148 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 IFT43Q96FT9 208 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 PCDH12Q9NPG4 1184 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 FTSJ1Q9UET6 329 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
NR1H3-228ENST00000525441 TP53BP1Q12888 1972 aaPredicted RBP17.68■□□□□ 0.42
NR1H3-228ENST00000525441 A0A1W2PQ67 120 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 MUSKO15146 869 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 RAD51BO15315 384 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 MFSD11O43934 449 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 PEX11BO96011 259 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 CYLC1P35663 651 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-228ENST00000525441 SLC1A1P43005 524 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 MAGEA1P43355 309 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 MMP13P45452 471 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 GALNT2Q10471 571 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 ODF2Q5BJF6 829 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 RALGPS1Q5JS13 557 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 NCBP2-AS2Q69YL0 99 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 TIGD7Q6NT04 549 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-228ENST00000525441 FAF2Q96CS3 445 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 BMFQ96LC9 184 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 NUDCD1Q96RS6 583 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 KLF6Q99612 283 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-228ENST00000525441 WRAP53Q9BUR4 548 aaKnown RBP17.67■□□□□ 0.42
NR1H3-228ENST00000525441 SCUBE2Q9NQ36 999 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 HAUS2Q9NVX0 235 aa17.67■□□□□ 0.42
NR1H3-228ENST00000525441 LRRD1A4D1F6 860 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 POM121BA6NF01 834 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 ZNF487B1APH4 448 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 RIOK3O14730 519 aaKnown RBP17.66■□□□□ 0.42
NR1H3-228ENST00000525441 ITIH2P19823 946 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 MX2P20592 715 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 KDELR1P24390 212 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 NFKBIAP25963 317 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 GARSP41250 739 aaKnown RBP17.66■□□□□ 0.42
NR1H3-228ENST00000525441 BNIP3Q12983 259 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 IFI16Q16666 785 aaKnown RBP17.66■□□□□ 0.42
NR1H3-228ENST00000525441 LRRC38Q5VT99 294 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 VSIG1Q86XK7 387 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 ADAMTS14Q8WXS8 1223 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 ECHDC3Q96DC8 303 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 ZNF830Q96NB3 372 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-228ENST00000525441 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 MGME1Q9BQP7 344 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 WASF3Q9UPY6 502 aa17.66■□□□□ 0.42
NR1H3-228ENST00000525441 CEP295Q9C0D2 2601 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 CFAP69A5D8W1 941 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 TOR1BO14657 336 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 HYAL3O43820 417 aaPredicted RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 SOCS5O75159 536 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 NEBLO76041 1014 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 LDOC1O95751 146 aaPredicted RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 MMP12P39900 470 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 NOP2P46087 812 aaKnown RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 RAB44Q7Z6P3 723 aaPredicted RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 GAS2L3Q86XJ1 694 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 SLC22A18ASQ8N1D0 253 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 EID2Q8N6I1 236 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 RAPGEF5Q92565 580 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 CENPTQ96BT3 561 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 CNTNAP3BQ96NU0 1288 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 SCNM1Q9BWG6 230 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 MAK16Q9BXY0 300 aaKnown RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 CNTNAP3Q9BZ76 1288 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 GPR27Q9NS67 375 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 DDX56Q9NY93 547 aaKnown RBP17.65■□□□□ 0.42
NR1H3-228ENST00000525441 NEUROG3Q9Y4Z2 214 aa17.65■□□□□ 0.42
NR1H3-228ENST00000525441 CHD8Q9HCK8 2581 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 SPTY2D1-AS1A0A0U1RR47 76 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 GOLGA8CPA6NN73 597 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 TRAFD1O14545 582 aaPredicted RBP17.64■□□□□ 0.41
NR1H3-228ENST00000525441 SPOPO43791 374 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 LZTS3O60299 673 aaPredicted RBP17.64■□□□□ 0.41
NR1H3-228ENST00000525441 IPO7O95373 1038 aaKnown RBP17.64■□□□□ 0.41
NR1H3-228ENST00000525441 LCA5LO95447 670 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 KRT1P04264 644 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 ATXN1LP0C7T5 689 aaKnown RBP17.64■□□□□ 0.41
NR1H3-228ENST00000525441 C6P13671 934 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 CR2P20023 1033 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 CCNCP24863 283 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 LIG3P49916 1009 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 THOP1P52888 689 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 PFN3P60673 137 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 HNRNPKP61978 463 aaKnown RBP eCLIP17.64■□□□□ 0.41
NR1H3-228ENST00000525441 YPEL5P62699 121 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 PDE1CQ14123 709 aaPredicted RBP17.64■□□□□ 0.41
NR1H3-228ENST00000525441 PTK2BQ14289 1009 aa17.64■□□□□ 0.41
NR1H3-228ENST00000525441 HS1BP3Q53T59 392 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms