RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 RIOK3O14730 519 aaKnown RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 SLC30A4O14863 429 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 VILLO15195 856 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 RAD51BO15315 384 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TSPAN6O43657 245 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 PRLP01236 227 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 JCHAINP01591 159 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 CFIP05156 583 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 GM2AP17900 193 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TGM2P21980 687 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 NUDT1P36639 197 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 CTSKP43235 329 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 MAPK8P45983 427 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 GRIA4P48058 902 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 NAP1L1P55209 391 aaKnown RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 RWDD2BP57060 319 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 DYNLT1P63172 113 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 CCDC15Q0P6D6 951 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 WASHC5Q12768 1159 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 RALGDSQ12967 914 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 GRIK2Q13002 908 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TFDP2Q14188 446 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 ZNF235Q14590 738 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 PDK1Q15118 436 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 RSPO4Q2I0M5 234 aaPredicted RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 STPG1Q5TH74 334 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TIGD7Q6NT04 549 aaPredicted RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 BRAT1Q6PJG6 821 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TTC7BQ86TV6 843 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TXLNBQ8N3L3 684 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 C12orf50Q8NA57 414 aaPredicted RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 NETO1Q8TDF5 533 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 ASB12Q8WXK4 309 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 SNX19Q92543 992 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 KLK6Q92876 244 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 EDEM2Q9BV94 578 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 HEMGNQ9BXL5 484 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 NUSAP1Q9BXS6 441 aaKnown RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 MAK16Q9BXY0 300 aaKnown RBP12.06□□□□□ -0.48
CLN8-207ENST00000524258 OSBPL8Q9BZF1 889 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 ATP13A3Q9H7F0 1226 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 PCDH12Q9NPG4 1184 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 GPR27Q9NS67 375 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 RBM22Q9NW64 420 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLN8-207ENST00000524258 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 DMTF1Q9Y222 760 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 CA5BQ9Y2D0 317 aa12.06□□□□□ -0.48
CLN8-207ENST00000524258 TRPM6Q9BX84 2022 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 IGLON5A6NGN9 336 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 C4orf47A7E2U8 309 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SOCS5O75159 536 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PRKCGP05129 697 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PDHA1P08559 390 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 GNSP15586 552 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PRLRP16471 622 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SERPINA4P29622 427 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 MMP12P39900 470 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SUOXP51687 545 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 DSC2Q02487 901 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 BCL2L1Q07817 233 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 KLF1Q13351 362 aaPredicted RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 PTPRRQ15256 657 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 AASDHQ4L235 1098 aaPredicted RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 KAZNQ674X7 775 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 KIAA1161Q6NSJ0 714 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 GCNT7Q6ZNI0 430 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PEX26Q7Z412 305 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 SPATS2Q86XZ4 545 aaKnown RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 CCNYQ8ND76 341 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 PIH1D2Q8WWB5 315 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 CENPTQ96BT3 561 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 FEM1CQ96JP0 617 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SERAC1Q96JX3 654 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 BMFQ96LC9 184 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 LENG8Q96PV6 779 aaPredicted RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 SEMA3CQ99985 751 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SLC17A9Q9BYT1 436 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 TSGA10Q9BZW7 698 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 IL21RQ9HBE5 538 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 DNAAF2Q9NVR5 837 aaKnown RBP12.05□□□□□ -0.48
CLN8-207ENST00000524258 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 ANKRD6Q9Y2G4 727 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PPP2R2CQ9Y2T4 447 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLN8-207ENST00000524258 SNX11Q9Y5W9 270 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 PLXNA2O75051 1894 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 SHROOM3Q8TF72 1996 aa12.05□□□□□ -0.48
CLN8-207ENST00000524258 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 MIF4GDA9UHW6 222 aaKnown RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 PRAMEF26H0Y7S4 382 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 SLC31A1O15431 190 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 KRT86O43790 486 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms