RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 FTCDO95954 541 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 PTPN7P35236 360 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 CSNK1EP49674 416 aaKnown RBP12.64□□□□□ -0.39
CCNC-216ENST00000523961 MAXP61244 160 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
CCNC-216ENST00000523961 IFI35P80217 286 aaPredicted RBP12.64□□□□□ -0.39
CCNC-216ENST00000523961 ITKQ08881 620 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ELP6Q0PNE2 266 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 AP1B1Q10567 949 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 UGP2Q16851 508 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ZNF284Q2VY69 593 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 SLC45A4Q5BKX6 768 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 STPG1Q5TH74 334 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ALG1LQ6GMV1 187 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 BBS12Q6ZW61 710 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ADAT2Q7Z6V5 191 aaKnown RBP12.64□□□□□ -0.39
CCNC-216ENST00000523961 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ALG3Q92685 438 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ECHDC3Q96DC8 303 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 SLC6A18Q96N87 628 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 SEMA3CQ99985 751 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 HEMGNQ9BXL5 484 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 OSBPL8Q9BZF1 889 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 NOD2Q9HC29 1040 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 TMEM9BQ9NQ34 198 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 AASDHPPTQ9NRN7 309 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 ZFR2Q9UPR6 939 aaKnown RBP12.64□□□□□ -0.39
CCNC-216ENST00000523961 SLCO1B1Q9Y6L6 691 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 DMDP11532 3685 aa12.64□□□□□ -0.39
CCNC-216ENST00000523961 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 A0A1B0GVT2 93 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 TTC24A2A3L6 582 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 PRAMEF26H0Y7S4 382 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 APOC4-APOC2K7ER74 178 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 KCNK1O00180 336 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 TRAFD1O14545 582 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 VILLO15195 856 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 SLC31A1O15431 190 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 SPINT1O43278 529 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 HTRA2O43464 458 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 GJB3O75712 270 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 JCHAINP01591 159 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 APOC2P02655 101 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 CD38P28907 300 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 AKT2P31751 481 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 ADCY2Q08462 1091 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 GRIK2Q13002 908 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 SGCGQ13326 291 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 STAT4Q14765 748 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 RSPO4Q2I0M5 234 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 CCDC181Q5TID7 509 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 SEL1L3Q68CR1 1132 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 ERAP2Q6P179 960 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 IL27RAQ6UWB1 636 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 CXorf40AQ8TE69 158 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 TFB1MQ8WVM0 346 aaKnown RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 ASB12Q8WXK4 309 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 KLK6Q92876 244 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 HES6Q96HZ4 224 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 NSMCE3Q96MG7 304 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 IL12RB2Q99665 862 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 SLC17A9Q9BYT1 436 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 PCDH12Q9NPG4 1184 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 FSCN3Q9NQT6 498 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 SAE1Q9UBE0 346 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 PACSIN2Q9UNF0 486 aaPredicted RBP12.63□□□□□ -0.39
CCNC-216ENST00000523961 ITM2BQ9Y287 266 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 ATP8A1Q9Y2Q0 1164 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 PPP2R2CQ9Y2T4 447 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 PCDHGC4Q9Y5F7 938 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 CACNA1EQ15878 2313 aa12.63□□□□□ -0.39
CCNC-216ENST00000523961 IGLON5A6NGN9 336 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 C4orf47A7E2U8 309 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 HACD1B0YJ81 288 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 CDX4O14627 284 aaPredicted RBP12.62□□□□□ -0.39
CCNC-216ENST00000523961 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
CCNC-216ENST00000523961 SLC30A4O14863 429 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
CCNC-216ENST00000523961 MTSS1O43312 755 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 MAGEC1O60732 1142 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 TJP3O95049 919 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 HLA-DQB2P05538 268 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 PYGMP11217 842 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 PRLRP16471 622 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
CCNC-216ENST00000523961 NFKBIAP25963 317 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 C21orf59P57076 290 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 DSC2Q02487 901 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 OVGP1Q12889 678 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 PRKD1Q15139 912 aaPredicted RBP12.62□□□□□ -0.39
CCNC-216ENST00000523961 TMEM52BQ4KMG9 183 aa12.62□□□□□ -0.39
CCNC-216ENST00000523961 LRRC73Q5JTD7 316 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms