RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 FBXO10Q9UK96 956 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 NUP210Q8TEM1 1887 aaPredicted RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PSMD3O43242 534 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 RNF40O75150 1001 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 ASLP04424 464 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 CA4P22748 312 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PRKCHP24723 683 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 AP1S1P61966 158 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 EIF4HQ15056 248 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 LONRF1Q17RB8 773 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 SLC44A4Q53GD3 710 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 KCTD11Q693B1 232 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 KDELC1Q6UW63 502 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 AGGF1Q8N302 714 aaeCLIP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PNPLA1Q8N8W4 532 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 TXNDC5Q8NBS9 432 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 MRGPRX3Q96LB0 322 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PABPC3Q9H361 631 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 KCTD3Q9Y597 815 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 ARL5AQ9Y689 179 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 EXOC1LA0A1B0GW35 172 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 FAM47DPA6NHR8 397 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 RIPK2O43353 540 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 ZNF821O75541 412 aaPredicted RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 SASH3O75995 380 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 TTC4O95801 387 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 CR2P20023 1033 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PSMD8P48556 350 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PFKPQ01813 784 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 EFTUD2Q15029 972 aaKnown RBP eCLIP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 KRT71Q3SY84 523 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PREPLQ4J6C6 727 aaPredicted RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 SDE2Q6IQ49 451 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 NCEH1Q6PIU2 408 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 GLT6D1Q7Z4J2 308 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 MCUQ8NE86 351 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 PPHLN1Q8NEY8 458 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 HNRNPLLQ8WVV9 542 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 FAM3CQ92520 227 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 CAVIN3Q969G5 261 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 TTC17Q96AE7 1141 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 HEPHQ9BQS7 1158 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 GPR63Q9BZJ6 419 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 EIF2B3Q9NR50 452 aaKnown RBP9.42□□□□□ -0.9
SDCBP-212ENST00000523483 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
SDCBP-212ENST00000523483 SMAPO00193 183 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 PPFIA2O75334 1257 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 POP4O95707 220 aaKnown RBP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 NDST3O95803 873 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 METAP1P53582 386 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 CNGA3Q16281 694 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 TRMT10BQ6PF06 316 aaKnown RBP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 RANBP10Q6VN20 620 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 METTL3Q86U44 580 aaKnown RBP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 PGBD3Q8N328 593 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 PPM1NQ8N819 430 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 FBF1Q8TES7 1133 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 PTPRN2Q92932 1015 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 ZIM3Q96PE6 472 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 PPP1R2P1Q96PQ5 205 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 WDR83Q9BRX9 315 aaKnown RBP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 SLC6A17Q9H1V8 727 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 DYRK4Q9NR20 520 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■■□□ 17.3
SDCBP-212ENST00000523483 SLC2A6Q9UGQ3 507 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 IKBKGQ9Y6K9 419 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 STON1Q9Y6Q2 735 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 AURKAO14965 403 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 POLBP06746 335 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 ERVK-10P10266 1014 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 NMBRP28336 390 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 ABCG1P45844 678 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.41□□□□□ -0.94e-7■□□□□ 10.7
SDCBP-212ENST00000523483 SIGLEC10Q96LC7 697 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 EBNA1BP2Q99848 306 aaKnown RBP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 FUT8Q9BYC5 575 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 IL22Q9GZX6 179 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 IL36AQ9UHA7 158 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 BDP1A6H8Y1 2624 aa9.41□□□□□ -0.9
SDCBP-212ENST00000523483 KIF26AQ9ULI4 1882 aaPredicted RBP9.41□□□□□ -0.9
SDCBP-212ENST00000523483 C1orf232A0A0U1RR37 186 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 GOLGA6L10A6NI86 522 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 ANKRD66B4E2M5 251 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 BHMG1C9JSJ3 638 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 ALOX15BO15296 676 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 VAPBO95292 243 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 KLF8O95600 359 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 SRFP11831 508 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 PHBP35232 272 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 PRAMEP78395 509 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 NSUN2Q08J23 767 aaKnown RBP eCLIP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 STARD3Q14849 445 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 HNRNPA1L2Q32P51 320 aaKnown RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 KCTD16Q68DU8 428 aa9.4□□□□□ -0.9
SDCBP-212ENST00000523483 ESRP1Q6NXG1 681 aaKnown RBP9.4□□□□□ -0.9
SDCBP-212ENST00000523483 GDPD4Q6W3E5 623 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms