RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 BECN1Q14457 450 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 FSTL5Q8N475 847 aaPredicted RBP26.22■■□□□ 1.79
PVT1-219ENST00000523427 EXD3Q8N9H8 876 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 GPT2Q8TD30 523 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 TBC1D31Q96DN5 1066 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 LIN37Q96GY3 246 aaPredicted RBP26.22■■□□□ 1.79
PVT1-219ENST00000523427 STRADBQ9C0K7 418 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 PISDQ9UG56 409 aa26.22■■□□□ 1.79
PVT1-219ENST00000523427 ATXN7L1Q9ULK2 861 aaPredicted RBP26.22■■□□□ 1.79
PVT1-219ENST00000523427 AHCTF1Q8WYP5 2266 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 KDELR3O43731 214 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 LSM8O95777 96 aaKnown RBP26.21■■□□□ 1.79
PVT1-219ENST00000523427 IGSF6O95976 241 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 PLEKP08567 350 aaPredicted RBP26.21■■□□□ 1.79
PVT1-219ENST00000523427 SDC4P31431 198 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 HK3P52790 923 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 INHBCP55103 352 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 RHOAP61586 193 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 NOMO3P69849 1222 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 ALG11Q2TAA5 492 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 CCDC14Q49A88 953 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 MANEALQ5VSG8 457 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 KLHDC7AQ5VTJ3 777 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 DPY19L2P1Q6NXN4 242 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 Q8N9G6 341 aaPredicted RBP26.21■■□□□ 1.79
PVT1-219ENST00000523427 EXOC2Q96KP1 924 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 TBATAQ96M53 351 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 ARHGAP9Q9BRR9 750 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 EDEM3Q9BZQ6 932 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 TTYH3Q9C0H2 523 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 NAV2Q8IVL1 2488 aa26.21■■□□□ 1.79
PVT1-219ENST00000523427 INSIG1O15503 277 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 RASGRP1O95267 797 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 ALPIP09923 528 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 JMJD7P0C870 316 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 NFKB2Q00653 900 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 LRRC14Q15048 493 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 CCDC185Q8N715 623 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 JOSD2Q8TAC2 188 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 SLC20A1Q8WUM9 679 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 TUBGCP2Q9BSJ2 902 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 KLC2Q9H0B6 622 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 OR1A2Q9Y585 309 aa26.2■■□□□ 1.78
PVT1-219ENST00000523427 SPTA1P02549 2419 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 A0A1W2PQM1 296 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 D6RAR5 112 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 ARHGAP6O43182 974 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 WSCD2Q2TBF2 565 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 GKN2Q86XP6 184 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 FAM114A1Q8IWE2 563 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 EXTL1Q92935 676 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 NCAPGQ9BPX3 1015 aa26.19■■□□□ 1.78
PVT1-219ENST00000523427 PIGNO95427 931 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 HTR1BP28222 390 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 NRG1Q02297 640 aaPredicted RBP26.18■■□□□ 1.78
PVT1-219ENST00000523427 INPP5AQ14642 412 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 MIIPQ5JXC2 388 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 SMYD5Q6GMV2 418 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 ARCQ7LC44 396 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 SLC30A5Q8TAD4 765 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 EPS8L1Q8TE68 723 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 C11orf70Q9BRQ4 267 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 LRRN3Q9H3W5 708 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 KLQ9UEF7 1012 aa26.18■■□□□ 1.78
PVT1-219ENST00000523427 CXorf51AA0A1B0GTR3 108 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 TMX2-CTNND1H3BSU7 103 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 TOR1BO14657 336 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 NOBOXO60393 691 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 PCCBP05166 539 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 ITIH1P19827 911 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 SRP54P61011 504 aaKnown RBP26.17■■□□□ 1.78
PVT1-219ENST00000523427 EIF3IQ13347 325 aaKnown RBP26.17■■□□□ 1.78
PVT1-219ENST00000523427 NFATC4Q14934 902 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 LINC00303Q3SY05 128 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 MLKLQ8NB16 471 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 FAM172AQ8WUF8 416 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 SGF29Q96ES7 293 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 APOOQ9BUR5 198 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 NEU3Q9UQ49 428 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 LOXL2Q9Y4K0 774 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 PCDHGA7Q9Y5G6 932 aa26.17■■□□□ 1.78
PVT1-219ENST00000523427 ZSCAN5CA6NGD5 496 aaPredicted RBP26.16■■□□□ 1.78
PVT1-219ENST00000523427 TMEM110-MUSTN1A8MSY1 372 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 GFPT2O94808 682 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 PRKCGP05129 697 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 UCHL3P15374 230 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 PEX5P50542 639 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 TMEM52BQ4KMG9 183 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 KCTD16Q68DU8 428 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 LVRNQ6Q4G3 990 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 VASH2Q86V25 355 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 PYROXD2Q8N2H3 581 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 HMCESQ96FZ2 354 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 TMEM74Q96NL1 305 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 NAA15Q9BXJ9 866 aaKnown RBP26.16■■□□□ 1.78
PVT1-219ENST00000523427 NOL6Q9H6R4 1146 aaKnown RBP26.16■■□□□ 1.78
PVT1-219ENST00000523427 DKK3Q9UBP4 350 aa26.16■■□□□ 1.78
PVT1-219ENST00000523427 F8VZ95 297 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 TNFP01375 233 aa26.15■■□□□ 1.78
PVT1-219ENST00000523427 EPHB2P29323 1055 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms