RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 ITM2BQ9Y287 266 aa12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 TP53BP1Q12888 1972 aaPredicted RBP12.78□□□□□ -0.36
TOP1MT-217ENST00000523417 CELSR3Q9NYQ7 3312 aa12.77□□□□□ -0.36
TOP1MT-217ENST00000523417 TMEM191CA6NGB0 347 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 CREB3O43889 395 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 HOXC4P09017 264 aaPredicted RBP12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 TNFAIP3P21580 790 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 TGM2P21980 687 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 IGFALSP35858 605 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 BLKP51451 505 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 THOP1P52888 689 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 OGDHQ02218 1023 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 TLE3Q04726 772 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 LRRC14Q15048 493 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 KLHL40Q2TBA0 621 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 FSTL5Q8N475 847 aaPredicted RBP12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 ZNF248Q8NDW4 579 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 MAPK15Q8TD08 544 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 NAT6Q93015 286 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 CRELD1Q96HD1 420 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 NCAPGQ9BPX3 1015 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 SLC13A1Q9BZW2 595 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 UBA2Q9UBT2 640 aaPredicted RBP12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 PCDHB1Q9Y5F3 818 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 RAI2Q9Y5P3 530 aa12.77□□□□□ -0.37
TOP1MT-217ENST00000523417 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 ARHGAP42A6NI28 874 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 J3KR12 359 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 ATXN7O15265 892 aaPredicted RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 YY2O15391 372 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 INSIG1O15503 277 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 USP12O75317 370 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 CSO75390 466 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 MYF5P13349 255 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 ITIH2P19823 946 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 MLLT3P42568 568 aaPredicted RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 HK3P52790 923 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 ADKP55263 362 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 SKOR1P84550 965 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 PPARDQ03181 441 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 RFTN1Q14699 578 aaPredicted RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 NR0B2Q15466 257 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 WSCD2Q2TBF2 565 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 DEFB133Q30KQ1 61 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 PRRT3Q5FWE3 981 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 VPS36Q86VN1 386 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 PHACTR4Q8IZ21 702 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 SNRNP27Q8WVK2 155 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 ECHDC3Q96DC8 303 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 SLC46A1Q96NT5 459 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 LRRC61Q9BV99 259 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 DPH1Q9BZG8 443 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 EDEM3Q9BZQ6 932 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 SLC39A8Q9C0K1 460 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 CLPBQ9H078 707 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 ASCL3Q9NQ33 180 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 TAS2R14Q9NYV8 317 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 APOBEC3BQ9UH17 382 aaKnown RBP12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 PCDHGA8Q9Y5G5 932 aa12.76□□□□□ -0.37
TOP1MT-217ENST00000523417 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 CPED1A4D0V7 1026 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 NTN3O00634 580 aaPredicted RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 TEX33O43247 280 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 MBD3O95983 291 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 ANXA6P08133 673 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 ALPIP09923 528 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 TSHRP16473 764 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 TRIM23P36406 574 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 PRKCIP41743 596 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 PAPOLAP51003 745 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 UCNP55089 124 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 PCBP4P57723 403 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 TPI1P60174 286 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 POLR2LP62875 67 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 ELOCQ15369 112 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 CDKN3Q16667 212 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 FAXCQ5TGI0 409 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 TMCO4Q5TGY1 634 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 ERAP2Q6P179 960 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 GUSBP11Q6P575 273 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 EFL1Q7Z2Z2 1120 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 GPR155Q7Z3F1 870 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 SRLQ86TD4 932 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 ZNF354CQ86Y25 554 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 SLC35F3Q8IY50 421 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 LZTR1Q8N653 840 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 OR6C4Q8NGE1 309 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 ATL2Q8NHH9 583 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 SCG3Q8WXD2 468 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 WBP1Q96G27 269 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 PRR11Q96HE9 360 aaPredicted RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 APOOQ9BUR5 198 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms