RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SGF29Q96ES7 293 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 GDAP1L1Q96MZ0 367 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 WRAP53Q9BUR4 548 aaKnown RBP22.99■■□□□ 1.27
PVT1-218ENST00000523328 CPEB1Q9BZB8 566 aaKnown RBP22.99■■□□□ 1.27
PVT1-218ENST00000523328 FAM117AQ9C073 453 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 TTYH3Q9C0H2 523 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 STRADBQ9C0K7 418 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 STARD5Q9NSY2 213 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 WDR70Q9NW82 654 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 DKK3Q9UBP4 350 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 IL17BQ9UHF5 180 aa22.99■■□□□ 1.27
PVT1-218ENST00000523328 ANKRD36A6QL64 1941 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 KDELR3O43731 214 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 RAMP2O60895 175 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 GADD45BO75293 160 aaPredicted RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 TMCC1O94876 653 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 LRIG2O94898 1065 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 LSM8O95777 96 aaKnown RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 NOMO3P69849 1222 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 RAPGEF1Q13905 1077 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 TCEA2Q15560 299 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 C15orf59Q2T9L4 293 aaPredicted RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 XKR5Q6UX68 686 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 USP53Q70EK8 1073 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 NOP9Q86U38 636 aaKnown RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 CPA5Q8WXQ8 436 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 EXTL1Q92935 676 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 TRIM4Q9C037 500 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 LRRN3Q9H3W5 708 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 METTL5Q9NRN9 209 aaKnown RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 GPR34Q9UPC5 381 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 COQ6Q9Y2Z9 468 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 MFHAS1Q9Y4C4 1052 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 HEMK1Q9Y5R4 338 aaPredicted RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 FHOD1Q9Y613 1164 aa22.98■■□□□ 1.27
PVT1-218ENST00000523328 UBR5O95071 2799 aaPredicted RBP22.98■■□□□ 1.27
PVT1-218ENST00000523328 TMEM110-MUSTN1A8MSY1 372 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 RASGRP1O95267 797 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 ITGB2P05107 769 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 CTSEP14091 401 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 ITGB6P18564 788 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 MAN2A1Q16706 1144 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 CDO1Q16878 200 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 WSCD2Q2TBF2 565 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 TMEM52BQ4KMG9 183 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 NETO2Q8NC67 525 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 TMEM74Q96NL1 305 aa22.97■■□□□ 1.27
PVT1-218ENST00000523328 TERTO14746 1132 aaKnown RBP22.96■■□□□ 1.27
PVT1-218ENST00000523328 NVLO15381 856 aaKnown RBP22.96■■□□□ 1.27
PVT1-218ENST00000523328 LIPCP11150 499 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 RAD51Q06609 339 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 NFATC4Q14934 902 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 LRRC14Q15048 493 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 CCDC14Q49A88 953 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 NAA35Q5VZE5 725 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 ENPP7Q6UWV6 458 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 RD3Q7Z3Z2 195 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 GKN2Q86XP6 184 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 MSANTD4Q8NCY6 345 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 OR6C4Q8NGE1 309 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 TBC1D31Q96DN5 1066 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 NDST4Q9H3R1 872 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 NOL6Q9H6R4 1146 aaKnown RBP22.96■■□□□ 1.27
PVT1-218ENST00000523328 KIAA1468Q9P260 1216 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 PISDQ9UG56 409 aa22.96■■□□□ 1.27
PVT1-218ENST00000523328 ARHGEF17Q96PE2 2063 aaPredicted RBP22.96■■□□□ 1.27
PVT1-218ENST00000523328 ZSCAN5CA6NGD5 496 aaPredicted RBP22.95■■□□□ 1.26
PVT1-218ENST00000523328 BUB1O43683 1085 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 IGSF6O95976 241 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 MMEP08473 750 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 JMJD7P0C870 316 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 SRP54P61011 504 aaKnown RBP22.95■■□□□ 1.26
PVT1-218ENST00000523328 NFKB2Q00653 900 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 MIIPQ5JXC2 388 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 KLHDC7AQ5VTJ3 777 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 KCTD16Q68DU8 428 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 GPR156Q8NFN8 814 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 EPS8L1Q8TE68 723 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 RXFP2Q8WXD0 754 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 APOOQ9BUR5 198 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 NAA15Q9BXJ9 866 aaKnown RBP22.95■■□□□ 1.26
PVT1-218ENST00000523328 KLC2Q9H0B6 622 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 LOXL2Q9Y4K0 774 aa22.95■■□□□ 1.26
PVT1-218ENST00000523328 COL12A1Q99715 3063 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 INSIG1O15503 277 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 PLEKP08567 350 aaPredicted RBP22.94■■□□□ 1.26
PVT1-218ENST00000523328 ITIH1P19827 911 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 HTR1BP28222 390 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 ZFP36L1Q07352 338 aaKnown RBP22.94■■□□□ 1.26
PVT1-218ENST00000523328 ELP6Q0PNE2 266 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 INPP5AQ14642 412 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 INO80DQ53TQ3 878 aaPredicted RBP22.94■■□□□ 1.26
PVT1-218ENST00000523328 CCDC185Q8N715 623 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 CASKIN2Q8WXE0 1202 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 RBM15Q96T37 977 aaKnown RBP eCLIP22.94■■□□□ 1.265e-9■■■■■ 29.3
PVT1-218ENST00000523328 ARHGAP9Q9BRR9 750 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 KLQ9UEF7 1012 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 OR1A2Q9Y585 309 aa22.94■■□□□ 1.26
PVT1-218ENST00000523328 PRAMEF33A0A0G2JMD5 474 aa22.93■■□□□ 1.26
PVT1-218ENST00000523328 C2CD4BA6NLJ0 364 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms