RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 NDRG1Q92597 394 aaKnown RBP4.58□□□□□ -1.68
CDKL3-209ENST00000523054 RSPRY1Q96DX4 576 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 CNDP1Q96KN2 507 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 SLITRK1Q96PX8 696 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 TTLL2Q9BWV7 592 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 SLITRK6Q9H5Y7 841 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 TTC12Q9H892 705 aaPredicted RBP4.58□□□□□ -1.68
CDKL3-209ENST00000523054 SP110Q9HB58 689 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 CD93Q9NPY3 652 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 ZNF71Q9NQZ8 489 aaPredicted RBP4.58□□□□□ -1.68
CDKL3-209ENST00000523054 RASSF1Q9NS23 344 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 MARCH5Q9NX47 278 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 DACT1Q9NYF0 836 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 CEP72Q9P209 647 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 IFT80Q9P2H3 777 aaPredicted RBP4.58□□□□□ -1.68
CDKL3-209ENST00000523054 GIMAP2Q9UG22 337 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 PRG3Q9Y2Y8 225 aaPredicted RBP4.58□□□□□ -1.68
CDKL3-209ENST00000523054 ZNF711Q9Y462 761 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.58□□□□□ -1.68
CDKL3-209ENST00000523054 FPGT-TNNI3KV9GXZ4 949 aa4.58□□□□□ -1.68
CDKL3-209ENST00000523054 TMEM131Q92545 1883 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 IGKV6D-41A0A0C4DH26 115 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 GOLGA6L10A6NI86 522 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 F8W8V4 182 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 SGSM2O43147 1006 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 HTRA2O43464 458 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 USP12O75317 370 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 CNOT4O95628 575 aaKnown RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 EFEMP2O95967 443 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 ZSCAN22P10073 491 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 MYCLP12524 364 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 INSRRP14616 1297 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 GCFC2P16383 781 aaKnown RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 SREBF1P36956 1147 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 MAN2A2P49641 1150 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 GALK1P51570 392 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 HNRNPH2P55795 449 aaKnown RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 C21orf58P58505 322 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 BASP1P80723 227 aaKnown RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 PMS2P11Q13670 270 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 DPYSQ14117 519 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 C15orf59Q2T9L4 293 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 WSCD2Q2TBF2 565 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 TWISTNBQ3B726 338 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 ANKDD1AQ495B1 522 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 HS1BP3Q53T59 392 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 RTP2Q5QGT7 225 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 CYP4A22Q5TCH4 519 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 VPS53Q5VIR6 699 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 ARHGAP36Q6ZRI8 547 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 CENPQQ7L2Z9 268 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 RAB11FIP4Q86YS3 637 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 ZCCHC9Q8N567 271 aaKnown RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 TMCO5AQ8N6Q1 288 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 RNF152Q8N8N0 203 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 NAT8LQ8N9F0 302 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 SPC24Q8NBT2 197 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 CHDHQ8NE62 594 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 CCDC110Q8TBZ0 833 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 TSPEARQ8WU66 669 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 HMGB4Q8WW32 186 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 CDKL2Q92772 493 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 SLC35B4Q969S0 331 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 ARL8AQ96BM9 186 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 C16orf92Q96LL3 132 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 PPP1R9BQ96SB3 815 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 NUDT16L1Q9BRJ7 211 aaKnown RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 HDAC8Q9BY41 377 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 PCIF1Q9H4Z3 704 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 PXMP2Q9NR77 195 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 ZNF624Q9P2J8 865 aaPredicted RBP4.57□□□□□ -1.68
CDKL3-209ENST00000523054 SLC5A6Q9Y289 635 aa4.57□□□□□ -1.68
CDKL3-209ENST00000523054 MYH7P12883 1935 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 NUP210Q8TEM1 1887 aaPredicted RBP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 CYP2D7A0A087X1C5 515 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 GOLGA6L4A6NEF3 574 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 CCDC154A6NI56 674 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 TTC34A8MYJ7 566 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 PDLIM1O00151 329 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 DDX3XO00571 662 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 HOXC11O43248 304 aaPredicted RBP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 TGDSO95455 350 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 CSTBP04080 98 aaKnown RBP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 GSNP06396 782 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 DHRS4L1P0CG22 281 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 PCNAP12004 261 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 COL6A2P12110 1019 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 CKMT1AP12532 417 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 KLK2P20151 261 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 PSMA4P25789 261 aaKnown RBP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 PBLDP30039 288 aaPredicted RBP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 BCL6P41182 706 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 RANBP1P43487 201 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 CD83Q01151 205 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 DR1Q01658 176 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 BNC1Q01954 994 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 KIF5AQ12840 1032 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 POLD3Q15054 466 aaPredicted RBP4.56□□□□□ -1.68
CDKL3-209ENST00000523054 TAF5Q15542 800 aa4.56□□□□□ -1.68
CDKL3-209ENST00000523054 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms