RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ABI3BPQ7Z7G0 1075 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 NAXDQ8IW45 347 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 PGBD5Q8N414 524 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 TEX26Q8N6G2 289 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 FAM174AQ8TBP5 190 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 FATE1Q969F0 183 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 ECHDC3Q96DC8 303 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 NSMCE3Q96MG7 304 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 CAMK1GQ96NX5 476 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 MGME1Q9BQP7 344 aa16.54■□□□□ 0.24
PABPC1-221ENST00000522720 DDX56Q9NY93 547 aaKnown RBP16.54■□□□□ 0.24
PABPC1-221ENST00000522720 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 TRAFD1O14545 582 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 RAD51BO15315 384 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 FLRT2O43155 660 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 SPOPO43791 374 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 CBFA2T3O75081 653 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 THEGLP0DJG4 465 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 CCNCP24863 283 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 MMP13P45452 471 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 RXRGP48443 463 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 CLDN2P57739 230 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 SLC10A2Q12908 348 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 SHBQ15464 509 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 TMEM52BQ4KMG9 183 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 RALGPS1Q5JS13 557 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 TIGD7Q6NT04 549 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 ZSWIM9Q86XI8 627 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 OXR1Q8N573 874 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 CXorf40AQ8TE69 158 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 SETD7Q8WTS6 366 aaKnown RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 MAML1Q92585 1016 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 BMFQ96LC9 184 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 KLF6Q99612 283 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 BAG1Q99933 345 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 NOD2Q9HC29 1040 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 PCDH12Q9NPG4 1184 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 PCOLCE2Q9UKZ9 415 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 REXO2Q9Y3B8 237 aaKnown RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 LRRK1Q38SD2 2015 aa16.53■□□□□ 0.24
PABPC1-221ENST00000522720 ARID1BQ8NFD5 2236 aaPredicted RBP16.53■□□□□ 0.24
PABPC1-221ENST00000522720 TTC24A2A3L6 582 aaPredicted RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 RCCD1A6NED2 376 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 RIOK3O14730 519 aaKnown RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 MATN3O15232 486 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 MMP20O60882 483 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 TM7SF2O76062 418 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 MAP3K6O95382 1288 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 KRT1P04264 644 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 TNNT1P13805 278 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 ARRB1P49407 418 aaPredicted RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 POLR2LP62875 67 aaKnown RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 FAM193AP78312 1265 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 ODF2Q5BJF6 829 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 SLC9A4Q6AI14 798 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 ERAP2Q6P179 960 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 DCP2Q8IU60 420 aaKnown RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 TMEM139Q8IV31 216 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 PLD5Q8N7P1 536 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 DENND6BQ8NEG7 585 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 OR13H1Q8NG92 308 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 SPOCK2Q92563 424 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 RNF25Q96BH1 459 aaPredicted RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 CENPTQ96BT3 561 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 CALR3Q96L12 384 aaKnown RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 MAK16Q9BXY0 300 aaKnown RBP16.52■□□□□ 0.24
PABPC1-221ENST00000522720 GOLPH3Q9H4A6 298 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 SCUBE2Q9NQ36 999 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 DTLQ9NZJ0 730 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 SALL4Q9UJQ4 1053 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 ATP8A1Q9Y2Q0 1164 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 PCDHB9Q9Y5E1 797 aa16.52■□□□□ 0.24
PABPC1-221ENST00000522720 TDRD6O60522 2096 aaKnown RBP16.52■□□□□ 0.23
PABPC1-221ENST00000522720 SPAARA0A1B0GVQ0 90 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 POM121BA6NF01 834 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 A6NNZ2 444 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 BTNL10A8MVZ5 291 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 FPGTO14772 594 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 YKT6O15498 198 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 HTRA2O43464 458 aaPredicted RBP16.51■□□□□ 0.23
PABPC1-221ENST00000522720 PSTPIP1O43586 416 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 SOCS5O75159 536 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 MMP12P39900 470 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 GRK6P43250 576 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 MAXP61244 160 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 SIM1P81133 766 aaPredicted RBP16.51■□□□□ 0.23
PABPC1-221ENST00000522720 IL9RQ01113 521 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 TRIP6Q15654 476 aaKnown RBP16.51■□□□□ 0.23
PABPC1-221ENST00000522720 C11orf63Q6NUN7 778 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 MFSD7Q6UXD7 560 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 KYAT3Q6YP21 454 aaKnown RBP16.51■□□□□ 0.23
PABPC1-221ENST00000522720 Q6ZSR6 202 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 SPC24Q8NBT2 197 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 TPCN2Q8NHX9 752 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.51■□□□□ 0.23
PABPC1-221ENST00000522720 RHBDD1Q8TEB9 315 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 HDAC11Q96DB2 347 aa16.51■□□□□ 0.23
PABPC1-221ENST00000522720 WRAP53Q9BUR4 548 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms