RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
CTNNA1-230ENST00000521724 ZNF229Q9UJW7 825 aa9.69□□□□□ -0.86
CTNNA1-230ENST00000521724 TLK1Q9UKI8 766 aa9.69□□□□□ -0.86
CTNNA1-230ENST00000521724 SARDHQ9UL12 918 aa9.69□□□□□ -0.86
CTNNA1-230ENST00000521724 M0QYV0 167 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SDHDO14521 159 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SYNCRIPO60506 623 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SNRPB2P08579 225 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 NAT1P18440 290 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ELK4P28324 431 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 LRPAP1P30533 357 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ASPAP45381 313 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 LEPRP48357 1165 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 CCT8P50990 548 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PLA2G16P53816 162 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TFAMQ00059 246 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 IFITM3Q01628 133 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PRPSAP1Q14558 356 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SPCS2Q15005 226 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ATP6AP1Q15904 470 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 DUOXA2Q1HG44 320 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 MTERF2Q49AM1 385 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 BROXQ5VW32 411 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 CRTC3Q6UUV7 619 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PLEKHG7Q6ZR37 379 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ERO1BQ86YB8 467 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 CMTR2Q8IYT2 770 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 LSMEM2Q8N112 164 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TMEM130Q8N3G9 435 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TTC30BQ8N4P2 665 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SLC7A14Q8TBB6 771 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 RDH11Q8TC12 318 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 STON2Q8WXE9 905 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TMEM143Q96AN5 459 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 CLIP3Q96DZ5 547 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SLC45A3Q96JT2 553 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ZNF670Q9BS34 389 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SNRNP25Q9BV90 132 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 RMND5AQ9H871 391 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PDLIM7Q9NR12 457 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PXMP2Q9NR77 195 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TBC1D13Q9NVG8 400 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.68□□□□□ -0.861e-7■■■■□ 25.6
CTNNA1-230ENST00000521724 SLC39A10Q9ULF5 831 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ANKRD12Q6UB98 2062 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TRIP11Q15643 1979 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 COL4A5P29400 1685 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TOR1BO14657 336 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 UBDO15205 165 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 NRP2O60462 931 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 DDHD2O94830 711 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SNAP29O95721 258 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 HSD3B2P26439 372 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TRIM32Q13049 653 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 BAATQ14032 418 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 EML3Q32P44 896 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PELI3Q8N2H9 469 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 Q8N9G6 341 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 KDM1BQ8NB78 822 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 CALML6Q8TD86 181 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 HTR3CQ8WXA8 447 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 HDAC10Q969S8 669 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ZNF669Q96BR6 464 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 PIWIL1Q96J94 861 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 MAELQ96JY0 434 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 FCRL3Q96P31 734 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SLC25A23Q9BV35 468 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 OSBPL10Q9BXB5 764 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ING2Q9H160 280 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 SLC38A10Q9HBR0 1119 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 MRGBPQ9NV56 204 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 GDAP2Q9NXN4 497 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 GTSE1Q9NYZ3 720 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 DNMT3BQ9UBC3 853 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 MTRRQ9UBK8 725 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 KLQ9UEF7 1012 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 EGFL7Q9UHF1 273 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 TIMM22Q9Y584 194 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 RAD54BQ9Y620 910 aa9.68□□□□□ -0.86
CTNNA1-230ENST00000521724 ZFC3H1O60293 1989 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 A0A0A0MRY4 1105 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 A6NL46 340 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 BCAS1O75363 584 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 GPC4O75487 556 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 JUNBP17275 347 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 SERPINB1P30740 379 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 RPS9P46781 194 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 CDH8P55286 799 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 SQLEQ14534 574 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 CARTPTQ16568 116 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 SPANXN3Q5MJ09 141 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 XAF1Q6GPH4 301 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 FAM45BPQ6NSW5 357 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 ZBTB33Q86T24 672 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 BRSK2Q8IWQ3 736 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 KIAA2013Q8IYS2 634 aa9.67□□□□□ -0.86
CTNNA1-230ENST00000521724 PARP8Q8N3A8 854 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms