RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ANXA5P08758 320 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 RRM2P31350 389 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 TRAF3Q13114 568 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 PGS1Q32NB8 556 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 POTEHQ6S545 545 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 IRF2BP1Q8IU81 584 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 TSPAN14Q8NG11 270 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 FAM45AQ8TCE6 357 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 DGCR14Q96DF8 476 aaKnown RBP16.3■□□□□ 0.2
USP42-207ENST00000521713 PADI4Q9UM07 663 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 AP3M1Q9Y2T2 418 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 A0A1W2PQ67 120 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 APODP05090 189 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 ATP6V1B2P21281 511 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 APLP1P51693 650 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 NAA20P61599 178 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 PARP15Q460N3 678 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 CDH24Q86UP0 819 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 EXOC3L1Q86VI1 746 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 UBE2E3Q969T4 207 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 CPXM1Q96SM3 734 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 AOC2O75106 756 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 SOX11P35716 441 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 ABL2P42684 1182 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 PFKPQ01813 784 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 FAAP100Q0VG06 881 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 JOSD2Q8TAC2 188 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 CERS2Q96G23 380 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 QRFPRQ96P65 431 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 MBD2Q9UBB5 411 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 DMTF1Q9Y222 760 aa16.3■□□□□ 0.2
USP42-207ENST00000521713 TAF4O00268 1085 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 GUCY1B2O75343 617 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 FTH1P02794 183 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 CAPN1P07384 714 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 PTPN2P17706 415 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 PIK3R1P27986 724 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 PPP2R1BP30154 601 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 SLC10A6Q3KNW5 377 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 KLHL12Q53G59 568 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 TRIQKQ629K1 86 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 EID3Q8N140 333 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
USP42-207ENST00000521713 MID1IP1Q9NPA3 183 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 CACNA2D2Q9NY47 1150 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 ARIH1Q9Y4X5 557 aaPredicted RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 DNTTP04053 509 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 CLTBP09497 229 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 AGKQ53H12 422 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 STARD8Q92502 1023 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 ELMO1Q92556 727 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 NDNQ99608 321 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 SLC25A23Q9BV35 468 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 ZCWPW1Q9H0M4 648 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 KRCC1Q9NPI7 259 aaPredicted RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 CXCR2P25025 360 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 RFX3P48380 749 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 KCNJ2P63252 427 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 IL5RAQ01344 420 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 FPGSQ05932 587 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 FSTL1Q12841 308 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 TRAF2Q12933 501 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 ZNF655Q8N720 491 aaPredicted RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 B3GNT5Q9BYG0 378 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 CPSF4O95639 269 aaKnown RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 CORO1AP31146 461 aaKnown RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 XYLT1Q86Y38 959 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 SLC44A2Q8IWA5 706 aaPredicted RBP16.29■□□□□ 0.2
USP42-207ENST00000521713 RIPOR3Q96MK2 946 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 UGT2B28Q9BY64 529 aa16.29■□□□□ 0.2
USP42-207ENST00000521713 FAM47E-STBD1D6RA91 191 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 RHOQP17081 205 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 TNNI3P19429 210 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 KELP23276 732 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 JAK1P23458 1154 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PSMA3P25788 255 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 HSPA14Q0VDF9 509 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 TCHHL1Q5QJ38 904 aaPredicted RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 PDZK1Q5T2W1 519 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PPP1R14BQ96C90 147 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 LGMNQ99538 433 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 HBS1LQ9Y450 684 aaKnown RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 NEDD8-MDP1E9PL57 170 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PEX1O43933 1283 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 COL6A1P12109 1028 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PLIN5Q00G26 463 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PDK4Q16654 411 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 FUT11Q495W5 492 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 ECHDC2Q86YB7 292 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 KRT78Q8N1N4 520 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PRELID2Q8N945 189 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 HEXDCQ8WVB3 486 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 UNKQ9C0B0 810 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms