RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DDX3YO15523 660 aaKnown RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 FSBPO95073 299 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 CCDC175P0C221 793 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3HP0C7X1 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 RGRP47804 291 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 PPP2CBP62714 309 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 PPP2CAP67775 309 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 GBE1Q04446 702 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 GRIK2Q13002 908 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3CQ6IPX1 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 ZNF765Q7L2R6 523 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 FAM124AQ86V42 546 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 ZNF354CQ86Y25 554 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3Q8IZP1 549 aaPredicted RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 NDUFAF2Q8N183 169 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 QKIQ96PU8 341 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLK4-209ENST00000521621 KLF6Q99612 283 aaPredicted RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 SLC17A9Q9BYT1 436 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TM6SF2Q9BZW4 377 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 NFKBIL1Q9UBC1 381 aaPredicted RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 TRHDEQ9UKU6 1024 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 ANKRD6Q9Y2G4 727 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 RALGAPA1Q6GYQ0 2036 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 A0A1W2PQU0 124 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 PGLSO95336 258 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 UGT2B4P06133 528 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 ID4P47928 161 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TP53INP2Q8IXH6 220 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 RGL4Q8IZJ4 473 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 SDR16C5Q8N3Y7 309 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 GRIN3AQ8TCU5 1115 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 A0A1B0GTQ1 180 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 A6NNZ2 444 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 OPHN1O60890 802 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 EPOP01588 193 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 ZNF30P17039 623 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 RABIFP47224 123 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 PFN3P60673 137 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 RALGDSQ12967 914 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 NOMO1Q15155 1222 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 ODF2Q5BJF6 829 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 KANSL1Q7Z3B3 1105 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 RFX6Q8HWS3 928 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 SPC24Q8NBT2 197 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 SCRN2Q96FV2 425 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 IMP4Q96G21 291 aaKnown RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 SLC25A51Q9H1U9 297 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 KLHL11Q9NVR0 708 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 DUSP10Q9Y6W6 482 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 TLR4O00206 839 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 DKK1O94907 266 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 TJP3O95049 919 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 WNT1P04628 370 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 PYGLP06737 847 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 CYP2A6P11509 494 aaPredicted RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 CEACAM1P13688 526 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 DNA2P51530 1060 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 KLF1Q13351 362 aaPredicted RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 SUZ12Q15022 739 aaKnown RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 INAVAQ3KP66 663 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 TEX44Q53QW1 395 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 GCNT7Q6ZNI0 430 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 ARMCX6Q7L4S7 300 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 TP53I13Q8NBR0 393 aaPredicted RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 TFB1MQ8WVM0 346 aaKnown RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 RMDN1Q96DB5 314 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 COQ10AQ96MF6 247 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 NSMCE3Q96MG7 304 aa9.53□□□□□ -0.88
CLK4-209ENST00000521621 TDRD1Q9BXT4 1180 aaKnown RBP9.53□□□□□ -0.88
CLK4-209ENST00000521621 PATE3B3GLJ2 98 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 FLRT2O43155 660 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 TM7SF2O76062 418 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 CPP00450 1065 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 MMP2P08253 660 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 CDK4P11802 303 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 CD59P13987 128 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 VIPR1P32241 457 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 C21orf59P57076 290 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 SKOR1P84550 965 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 DPTQ07507 201 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 MTM1Q13496 603 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 PEX26Q7Z412 305 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 NRSN1Q8IZ57 195 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 RYBPQ8N488 228 aaPredicted RBP9.52□□□□□ -0.88
CLK4-209ENST00000521621 MINDY1Q8N5J2 469 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 ATL2Q8NHH9 583 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 CXorf40AQ8TE69 158 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 PIH1D2Q8WWB5 315 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 KRT35Q92764 455 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 P3H4Q92791 437 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 RNF25Q96BH1 459 aaPredicted RBP9.52□□□□□ -0.88
CLK4-209ENST00000521621 SERAC1Q96JX3 654 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 TEKT5Q96M29 485 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 SLC6A18Q96N87 628 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms