RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FAM71BQ8TC56 605 aa17.22■□□□□ 0.35
SQLE-205ENST00000521232 CXorf40AQ8TE69 158 aa17.22■□□□□ 0.35
SQLE-205ENST00000521232 ZNF599Q96NL3 588 aa17.22■□□□□ 0.35
SQLE-205ENST00000521232 PSKH2Q96QS6 385 aa17.22■□□□□ 0.35
SQLE-205ENST00000521232 CINPQ9BW66 212 aaPredicted RBP17.22■□□□□ 0.35
SQLE-205ENST00000521232 PCDH18Q9HCL0 1135 aa17.22■□□□□ 0.35
SQLE-205ENST00000521232 UCKL1Q9NWZ5 548 aa17.22■□□□□ 0.35
SQLE-205ENST00000521232 CHD6Q8TD26 2715 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 TRIM38O00635 465 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 CSF2P04141 144 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 GIMD1P0DJR0 217 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 CKMT2P17540 419 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 XPAP23025 273 aaPredicted RBP17.21■□□□□ 0.35
SQLE-205ENST00000521232 IL4RP24394 825 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 ACADVLP49748 655 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 LBRQ14739 615 aaKnown RBP17.21■□□□□ 0.35
SQLE-205ENST00000521232 PROX2Q3B8N5 592 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 DHRS13Q6UX07 377 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 CAMK1DQ8IU85 385 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 VSTM4Q8IW00 320 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 ZNF564Q8TBZ8 553 aaPredicted RBP17.21■□□□□ 0.35
SQLE-205ENST00000521232 C1QTNF7Q9BXJ2 289 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 RCOR3Q9P2K3 495 aaPredicted RBP17.21■□□□□ 0.35
SQLE-205ENST00000521232 UVRAGQ9P2Y5 699 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 SEPT3Q9UH03 358 aa17.21■□□□□ 0.35
SQLE-205ENST00000521232 DSPP15924 2871 aaKnown RBP17.21■□□□□ 0.35
SQLE-205ENST00000521232 ZFHX4Q86UP3 3567 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 SSU72P8A0A1W2PR75 194 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 TOR1BO14657 336 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 RIOK3O14730 519 aaKnown RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 MUSKO15146 869 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 SIGLEC6O43699 453 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 MAFKO60675 156 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 RFPL3O75679 317 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 PEX11BO96011 259 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 H2AFZP0C0S5 128 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 NME1P15531 152 aaKnown RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 ACP1P24666 158 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 SERPINA4P29622 427 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 RENBPP51606 427 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 ARSEP51690 589 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 HNRNPKP61978 463 aaKnown RBP eCLIP17.2■□□□□ 0.34
SQLE-205ENST00000521232 YPEL5P62699 121 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 SLC10A7Q0GE19 358 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 ILKQ13418 452 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 PDE1CQ14123 709 aaPredicted RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 HADHQ16836 314 aaKnown RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 CCDC157Q569K6 752 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 ZNF542PQ5EBM4 170 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 TPRG1LQ5T0D9 272 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 TMCO4Q5TGY1 634 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 H2AFVQ71UI9 128 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 PARGQ86W56 976 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 TMPRSS12Q86WS5 348 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 ZSWIM9Q86XI8 627 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 TP53I13Q8NBR0 393 aaPredicted RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 OR4C6Q8NH72 309 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 ECHDC3Q96DC8 303 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 WRAP53Q9BUR4 548 aaKnown RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 CAAP1Q9H8G2 361 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 MBNL1Q9NR56 388 aaKnown RBP17.2■□□□□ 0.34
SQLE-205ENST00000521232 DNAJC28Q9NX36 388 aa17.2■□□□□ 0.34
SQLE-205ENST00000521232 ACACAQ13085 2346 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 CFAP69A5D8W1 941 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 NEMP2A6NFY4 417 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 TRAFD1O14545 582 aaPredicted RBP17.19■□□□□ 0.34
SQLE-205ENST00000521232 SCAMP1O15126 338 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 PROSCO94903 275 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 SERPINB6P35237 376 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 IGFALSP35858 605 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 SCNN1BP51168 640 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 CDH6P55285 790 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 BCL2L1Q07817 233 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 CAMK2BQ13554 666 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 PTK2BQ14289 1009 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 KRT81Q14533 505 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 AGERQ15109 404 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 CFAP58Q5T655 872 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 ERAP2Q6P179 960 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 CTNNBL1Q8WYA6 563 aaPredicted RBP17.19■□□□□ 0.34
SQLE-205ENST00000521232 ZCCHC14Q8WYQ9 949 aaKnown RBP17.19■□□□□ 0.34
SQLE-205ENST00000521232 NSMCE3Q96MG7 304 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 PACSIN1Q9BY11 444 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 ZNHIT6Q9NWK9 470 aaKnown RBP17.19■□□□□ 0.34
SQLE-205ENST00000521232 CTTNBP2NLQ9P2B4 639 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 LCMT1Q9UIC8 334 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 KLF15Q9UIH9 416 aa17.19■□□□□ 0.34
SQLE-205ENST00000521232 PKD1L2Q7Z442 2459 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 CD48P09326 243 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 CR2P20023 1033 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 HSPA9P38646 679 aaKnown RBP17.18■□□□□ 0.34
SQLE-205ENST00000521232 MMP12P39900 470 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 SSR1P43307 286 aaKnown RBP17.18■□□□□ 0.34
SQLE-205ENST00000521232 AP1S1P61966 158 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 POLR2LP62875 67 aaKnown RBP17.18■□□□□ 0.34
SQLE-205ENST00000521232 EIF2B5Q13144 721 aaKnown RBP17.18■□□□□ 0.34
SQLE-205ENST00000521232 TSR1Q2NL82 804 aaKnown RBP17.18■□□□□ 0.34
SQLE-205ENST00000521232 ATP13A4Q4VNC1 1196 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms