RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RHODO00212 210 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TGFB1I1O43294 461 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SERPINC1P01008 464 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 ADRB2P07550 413 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SPARCP09486 303 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CSH1P0DML2 217 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CSH2P0DML3 217 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 NR2F1P10589 423 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TNFRSF1BP20333 461 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 IL11P20809 199 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TYK2P29597 1187 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 RGS2P41220 211 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
SQLE-204ENST00000520493 PGGT1BP53609 377 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 PRAMEP78395 509 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 GAD2Q05329 585 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 NEXNQ0ZGT2 675 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 EPS8Q12929 822 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CHAF1BQ13112 559 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 BECN1Q14457 450 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 RPE65Q16518 533 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SMTNL2Q2TAL5 461 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 AP5B1Q2VPB7 878 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 DUSP28Q4G0W2 176 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SLC9B1Q4ZJI4 515 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 ATG9BQ674R7 924 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CDC73Q6P1J9 531 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 NCEH1Q6PIU2 408 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 IL20RBQ6UXL0 311 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CYB5R4Q7L1T6 521 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 PRSS45Q7RTY3 260 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TADA2BQ86TJ2 420 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 DDIASQ8IXT1 998 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SCAIQ8N9R8 606 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 CCDC191Q8NCU4 936 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 HDAC7Q8WUI4 952 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TMEM170AQ8WVE7 144 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 POMGNT1Q8WZA1 660 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 ARHGEF2Q92974 986 aaKnown RBP4.28□□□□□ -1.72
SQLE-204ENST00000520493 FAM120BQ96EK7 910 aaKnown RBP4.28□□□□□ -1.72
SQLE-204ENST00000520493 ZNF347Q96SE7 839 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 WDR83Q9BRX9 315 aaKnown RBP4.28□□□□□ -1.72
SQLE-204ENST00000520493 Q9N2J8 555 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 ZCCHC17Q9NP64 241 aaKnown RBP4.28□□□□□ -1.72
SQLE-204ENST00000520493 ENTPD7Q9NQZ7 604 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SEPT11Q9NVA2 429 aaKnown RBP4.28□□□□□ -1.72
SQLE-204ENST00000520493 ARL15Q9NXU5 204 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 GRHL1Q9NZI5 618 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 NCKIPSDQ9NZQ3 722 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 UPB1Q9UBR1 384 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 SLCO3A1Q9UIG8 710 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 UTS2RQ9UKP6 389 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TMEM5Q9Y2B1 443 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 TEX13CA0A0J9YWL9 993 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 A0A1W2PRG0 241 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 ARHGAP10A1A4S6 786 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 LIPT2A6NK58 231 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 AGAP14A8MT82 685 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 H7C0S8 307 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 BCAT2O15382 392 aaPredicted RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 SMAD6O43541 496 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 CEP104O60308 925 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 NFATC1O95644 943 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 EIF2S1P05198 315 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 HOXB5P09067 269 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 IRF1P10914 325 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 FCGR2AP12318 317 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 GLULP15104 373 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 FMO4P31512 558 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 CTCFP49711 727 aaPredicted RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 NANOS2P60321 138 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 YWHAZP63104 245 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 OLR1P78380 273 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 ZBED6P86452 979 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 MC1RQ01726 317 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 CYP4A11Q02928 519 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 CDC16Q13042 620 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 TDGQ13569 410 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 CRYMQ14894 314 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 PGM5Q15124 567 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 TAF11Q15544 211 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 C5orf22Q49AR2 442 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 TTC39AQ5SRH9 613 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 PLEKHS1Q5SXH7 462 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 TMEM268Q5VZI3 342 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 IKBIPQ70UQ0 350 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 MEPCEQ7L2J0 689 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 PLD5Q8N7P1 536 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 SCFD2Q8WU76 684 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 ADAD1Q96M93 576 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 TMEM204Q9BSN7 226 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 STRA6Q9BX79 667 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 RBM38Q9H0Z9 239 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 AAMDCQ9H7C9 122 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 ATP8A2Q9NTI2 1148 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 PEMTQ9UBM1 199 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 LIMA1Q9UHB6 759 aaKnown RBP4.27□□□□□ -1.73
SQLE-204ENST00000520493 LAMP3Q9UQV4 416 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 MAGED1Q9Y5V3 778 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms