RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 TSPY1Q01534 308 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 PSMD6Q15008 389 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 TMEM266Q2M3C6 531 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 CRELD2Q6UXH1 353 aaPredicted RBP7.71□□□□□ -1.18
LSM1-202ENST00000520286 ZNF813Q6ZN06 617 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 ANKRD23Q86SG2 305 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 LURAP1LQ8IV03 231 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 POC5Q8NA72 575 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 BCAS4Q8TDM0 211 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 PIMREGQ9BSJ6 248 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 KRTAP4-6Q9BYQ5 205 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 WDR6Q9NNW5 1121 aaKnown RBP7.71□□□□□ -1.18
LSM1-202ENST00000520286 MRPL15Q9P015 296 aaKnown RBP7.71□□□□□ -1.18
LSM1-202ENST00000520286 CNOT8Q9UFF9 292 aaKnown RBP7.71□□□□□ -1.18
LSM1-202ENST00000520286 AAR2Q9Y312 384 aaKnown RBP7.71□□□□□ -1.18
LSM1-202ENST00000520286 ZNF711Q9Y462 761 aa7.71□□□□□ -1.18
LSM1-202ENST00000520286 NEO1Q92859 1461 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 TRBV5-7A0A0A0MS05 114 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 TYW5A2RUC4 315 aaKnown RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 C2CD4BA6NLJ0 364 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 SCAMP1O15126 338 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 NDUFS3O75489 264 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 MT-CYBP00156 380 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 GCP02774 474 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 APOA4P06727 396 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 RYKP34925 604 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 CENPAP49450 140 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 HSF1Q00613 529 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 CDC16Q13042 620 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 ALDH1L2Q3SY69 923 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 ALG10Q5BKT4 473 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 ALG10BQ5I7T1 473 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 EARS2Q5JPH6 523 aaKnown RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 KIAA0930Q6ICG6 404 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 GLDNQ6ZMI3 551 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 CMASQ8NFW8 434 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 ZKSCAN4Q969J2 545 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 ZNF419Q96HQ0 510 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 SIN3AQ96ST3 1273 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 TEX12Q9BXU0 123 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 GOLGA2P5Q9HBQ8 144 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 ZCCHC17Q9NP64 241 aaKnown RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 FBXL17Q9UF56 701 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 UTS2RQ9UKP6 389 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 LAMP3Q9UQV4 416 aa7.7□□□□□ -1.18
LSM1-202ENST00000520286 MAGED1Q9Y5V3 778 aaPredicted RBP7.7□□□□□ -1.18
LSM1-202ENST00000520286 ATP10BO94823 1461 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 FAM90A8PA6NJQ4 464 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 FOXO6A8MYZ6 492 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 RHODO00212 210 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 CTDSP2O14595 271 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 ADAM20O43506 726 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 FAM90A13PP0C7W8 464 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 FAM90A24PP0C7X0 464 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 SLC16A2P36021 539 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 PRPF4BQ13523 1007 aaKnown RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 ASTE1Q2TB18 679 aaPredicted RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 ZSCAN23Q3MJ62 389 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 ZNF362Q5T0B9 420 aaPredicted RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 JADE1Q6IE81 842 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 LRRC8EQ6NSJ5 796 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 DPP10Q8N608 796 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 KCTD6Q8NC69 237 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 GABPB2Q8TAK5 448 aaPredicted RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 SAT2Q96F10 170 aaPredicted RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 SH3GLB2Q9NR46 395 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 ARPP21Q9UBL0 812 aaPredicted RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 PLEKHB1Q9UF11 243 aaPredicted RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 NENFQ9UMX5 172 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 NOL7Q9UMY1 257 aaKnown RBP7.69□□□□□ -1.18
LSM1-202ENST00000520286 MADDQ8WXG6 1647 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 UTYO14607 1347 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 AOX1Q06278 1338 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 CFAP43Q8NDM7 1665 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 POGZQ7Z3K3 1410 aa7.69□□□□□ -1.18
LSM1-202ENST00000520286 A0A096LPK6 155 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 KLRF2D3W0D1 207 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 TP73O15350 636 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 FOXN1O15353 648 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 UGDHO60701 494 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 SLC25A12O75746 678 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 NKX2-2O95096 273 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 IL7RP16871 459 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 CTPS1P17812 591 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 ITGAXP20702 1163 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 NRIP1P48552 1158 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 TUBA4AP68366 448 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 GRIK3Q13003 919 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 PKP1Q13835 747 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 DRAP1Q14919 205 aaPredicted RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 NTRK2Q16620 822 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 TMEM119Q4V9L6 283 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 CCDC184Q52MB2 194 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 CXorf66Q5JRM2 361 aaPredicted RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 GARNL3Q5VVW2 1013 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 TMC8Q8IU68 726 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 ZCCHC9Q8N567 271 aaKnown RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 WIPF2Q8TF74 440 aaPredicted RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 NELL1Q92832 810 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 SLC22A18Q96BI1 424 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms