RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HDAC3O15379 428 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 ADAM12O43184 909 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 KRT34O76011 436 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 TFEBP19484 476 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 MAPKAPK2P49137 400 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 YBEYP58557 167 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-213ENST00000520267 SMARCB1Q12824 385 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 PRKAA1Q13131 559 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 PEX6Q13608 980 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 FSCBQ5H9T9 825 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 SEL1L3Q68CR1 1132 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 LDB1Q86U70 411 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-213ENST00000520267 NPAS4Q8IUM7 802 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 LGI2Q8N0V4 545 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 CRIPAKQ8N1N5 446 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 CFAP61Q8NHU2 1237 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 SEPT8Q92599 483 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 CMTM5Q96DZ9 223 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 TTPALQ9BTX7 342 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 OSBPL1AQ9BXW6 950 aa25.93■■□□□ 1.74
COL13A1-213ENST00000520267 SCN5AQ14524 2016 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 PRAMEF11O60813 436 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 KLF10Q13118 480 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 CSHL1Q14406 222 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 TRMT5Q32P41 509 aaKnown RBP25.92■■□□□ 1.74
COL13A1-213ENST00000520267 METTL21CQ5VZV1 264 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 ANKS3Q6ZW76 656 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 TXNDC5Q8NBS9 432 aaKnown RBP25.92■■□□□ 1.74
COL13A1-213ENST00000520267 NRG4Q8WWG1 115 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 HDAC10Q969S8 669 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 ANKRD27Q96NW4 1050 aa25.92■■□□□ 1.74
COL13A1-213ENST00000520267 MRPL57Q9BQC6 102 aaKnown RBP25.92■■□□□ 1.74
COL13A1-213ENST00000520267 SLC6A4P31645 630 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 SLC34A1Q06495 639 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 ELAVL2Q12926 359 aaKnown RBP25.91■■□□□ 1.74
COL13A1-213ENST00000520267 CILP2Q8IUL8 1156 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 CCNYL1Q8N7R7 359 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 OR6P1Q8NGX9 317 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 STX18Q9P2W9 335 aaKnown RBP25.91■■□□□ 1.74
COL13A1-213ENST00000520267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.91■■□□□ 1.74
COL13A1-213ENST00000520267 OR51F1A6NGY5 319 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 ZMPSTE24O75844 475 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 EPHA3P29320 983 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 GCKP35557 465 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 ERFP50548 548 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 CLCN5P51795 746 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 TMCO4Q5TGY1 634 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 FRMD7Q6ZUT3 714 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 RNF135Q8IUD6 432 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 NAF1Q96HR8 494 aaKnown RBP25.91■■□□□ 1.74
COL13A1-213ENST00000520267 NUF2Q9BZD4 464 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 ACTL7AQ9Y615 435 aa25.91■■□□□ 1.74
COL13A1-213ENST00000520267 F5H5T6 163 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 SLC7A4O43246 635 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 LDB2O43679 373 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 COX4I1P13073 169 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 CD1EP15812 388 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 ACTR3P61158 418 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 ACBD5Q5T8D3 534 aaPredicted RBP25.9■■□□□ 1.74
COL13A1-213ENST00000520267 C2orf15Q8WU43 125 aaKnown RBP25.9■■□□□ 1.74
COL13A1-213ENST00000520267 TMEM175Q9BSA9 504 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 POLR1EQ9GZS1 481 aaKnown RBP25.9■■□□□ 1.74
COL13A1-213ENST00000520267 PDFQ9HBH1 243 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 MARCH4Q9P2E8 410 aaPredicted RBP25.9■■□□□ 1.74
COL13A1-213ENST00000520267 CHD5Q8TDI0 1954 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 A0A0D9SEW6 157 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 NEMP2A6NFY4 417 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 HK2P52789 917 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 DEFB115Q30KQ5 88 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 LSM12Q3MHD2 195 aaKnown RBP25.9■■□□□ 1.74
COL13A1-213ENST00000520267 C6orf163Q5TEZ5 329 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 HECTD2Q5U5R9 776 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 C1orf146Q5VVC0 180 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 FBXO22Q8NEZ5 403 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 TTLL2Q9BWV7 592 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 CFHR5Q9BXR6 569 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 MFSD1Q9H3U5 465 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 POMKQ9H5K3 350 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 WASF2Q9Y6W5 498 aa25.9■■□□□ 1.74
COL13A1-213ENST00000520267 JUNP05412 331 aaKnown RBP25.89■■□□□ 1.74
COL13A1-213ENST00000520267 RPL17P18621 184 aaKnown RBP25.89■■□□□ 1.74
COL13A1-213ENST00000520267 PRDX6P30041 224 aa25.89■■□□□ 1.74
COL13A1-213ENST00000520267 KPNA1P52294 538 aaPredicted RBP25.89■■□□□ 1.74
COL13A1-213ENST00000520267 CUL3Q13618 768 aa25.89■■□□□ 1.74
COL13A1-213ENST00000520267 ZNF235Q14590 738 aa25.89■■□□□ 1.74
COL13A1-213ENST00000520267 TECRLQ5HYJ1 363 aa25.89■■□□□ 1.74
COL13A1-213ENST00000520267 OR52K2Q8NGK3 314 aa25.89■■□□□ 1.74
COL13A1-213ENST00000520267 GABPB2Q8TAK5 448 aaPredicted RBP25.89■■□□□ 1.74
COL13A1-213ENST00000520267 ITGAXP20702 1163 aa25.89■■□□□ 1.73
COL13A1-213ENST00000520267 VHLP40337 213 aa25.89■■□□□ 1.73
COL13A1-213ENST00000520267 KPNA2P52292 529 aaKnown RBP25.89■■□□□ 1.73
COL13A1-213ENST00000520267 PRAMEP78395 509 aa25.89■■□□□ 1.73
COL13A1-213ENST00000520267 PDCD6IPQ8WUM4 868 aaKnown RBP25.89■■□□□ 1.73
COL13A1-213ENST00000520267 IFT43Q96FT9 208 aa25.89■■□□□ 1.73
COL13A1-213ENST00000520267 BUD23O43709 281 aaKnown RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 ACSL4O60488 711 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 S1PR4O95977 384 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 ATP5F1P24539 256 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 CLNS1AP54105 237 aaKnown RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 ASPHQ12797 758 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms