RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 FASTKD1Q53R41 847 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 GLRA4Q5JXX5 417 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SH2D4BQ5SQS7 431 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 N4BP2L1Q5TBK1 243 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 MROH9Q5TGP6 573 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TMCO4Q5TGY1 634 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MANEALQ5VSG8 457 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 METTL21CQ5VZV1 264 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 FAM171BQ6P995 826 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 RFWD3Q6PCD5 774 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 PGM2L1Q6PCE3 622 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 AAGABQ6PD74 315 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 DCLRE1AQ6PJP8 1040 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SLC30A9Q6PML9 568 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 DSTYKQ6XUX3 929 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 DENND5BQ6ZUT9 1274 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TTC7BQ86TV6 843 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TLK2Q86UE8 772 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MYLK4Q86YV6 388 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 ARID3BQ8IVW6 561 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 WDR75Q8IWA0 830 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 SULF2Q8IWU5 870 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TAB3Q8N5C8 712 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 RNF169Q8NCN4 708 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 GSTCDQ8NEC7 633 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 ZMIZ2Q8NF64 920 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TTC8Q8TAM2 541 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 RDH11Q8TC12 318 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MICAL1Q8TDZ2 1067 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 C17orf50Q8WW18 174 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 DNAJB3Q8WWF6 145 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 THOC1Q96FV9 657 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 PRR11Q96HE9 360 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 SENP8Q96LD8 212 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 LGMNQ99538 433 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SLC38A3Q99624 504 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 PKMYT1Q99640 499 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SMOQ99835 787 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SYT15Q9BQS2 421 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MECRQ9BV79 373 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TRIM62Q9BVG3 475 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 KIFC1Q9BW19 673 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MAGEB5Q9BZ81 275 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 C20orf27Q9GZN8 174 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 IL22Q9GZX6 179 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 FAM49AQ9H0Q0 323 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 UPF3AQ9H1J1 476 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 LRRC4Q9HBW1 653 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SPON1Q9HCB6 807 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 ALG13Q9NP73 1137 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 CRTAC1Q9NQ79 661 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 KRT82Q9NSB4 513 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 PIGVQ9NUD9 493 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 SYBUQ9NX95 663 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 ARHGEF38Q9NXL2 777 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 UTP6Q9NYH9 597 aaKnown RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 COPG2Q9UBF2 871 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 CORO1CQ9ULV4 474 aaPredicted RBP5.13□□□□□ -1.59
SDC2-204ENST00000519914 ANKRD6Q9Y2G4 727 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MFHAS1Q9Y4C4 1052 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 HES2Q9Y543 173 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 PCDHB12Q9Y5F1 795 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 TRPV2Q9Y5S1 764 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 MAD1L1Q9Y6D9 718 aa5.13□□□□□ -1.59
SDC2-204ENST00000519914 CASP8AP2Q9UKL3 1982 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 MYLKQ15746 1914 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 NYNRINQ9P2P1 1898 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 FRMPD3Q5JV73 1810 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 G3V2L1 256 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 I6L893 689 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 M0QYT0 321 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 M0QZQ0 153 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 NRP1O14786 923 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 TREHO43280 583 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 FKBP6O75344 327 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ENTPD5O75356 428 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 BEST1O76090 585 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 LTFP02788 710 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 COL6A2P12110 1019 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CCNCP24863 283 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PCSK1P29120 753 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PGM1P36871 562 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SERPINB5P36952 375 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SLC1A6P48664 564 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CLCN2P51788 898 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 TKTL1P51854 596 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SESN3P58005 492 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 TPI1P60174 286 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ABCE1P61221 599 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 PITX1P78337 314 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 MRPS35P82673 323 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 MRPS6P82932 125 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 COG7P83436 770 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 XIAPP98170 497 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PURAQ00577 322 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 ROR2Q01974 943 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 IFRD2Q12894 506 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 IKZF1Q13422 519 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 MTM1Q13496 603 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms