RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 CLEC20AQ6ZU45 233 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 BHLHA9Q7RTU4 235 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 KRTAP1-3Q8IUG1 177 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 HID1Q8IV36 788 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 MFN1Q8IWA4 741 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 RHOT1Q8IXI2 618 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 FSTL5Q8N475 847 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 ESX1Q8N693 406 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 C4orf32Q8N8J7 132 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 C12orf29Q8N999 325 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 OR6C4Q8NGE1 309 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 ERMNQ8TAM6 284 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 CHTF18Q8WVB6 975 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 FEM1CQ96JP0 617 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 SMAD5Q99717 465 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 SMYD3Q9H7B4 428 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 ZBTB20Q9HC78 741 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 MBNL1Q9NR56 388 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 CLIC5Q9NZA1 410 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 ORC3Q9UBD5 711 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 HMGXB4Q9UGU5 601 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 B3GNT3Q9Y2A9 372 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 PCDHGA6Q9Y5G7 932 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 USP3Q9Y6I4 520 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 HIVEP2P31629 2446 aa6.88□□□□□ -1.31
CTNNA1-216ENST00000519489 IGLON5A6NGN9 336 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 K7ENM7 598 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 MCF2LO15068 1137 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ZNF185O15231 689 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 TRIM49P0CI25 452 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 TRIM49CP0CI26 452 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 AMPD1P23109 780 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 SLC12A3P55017 1021 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 GTF2BQ00403 316 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 PPARDQ03181 441 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 TRA2AQ13595 282 aaKnown RBP eCLIP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 DNASE1L3Q13609 305 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ARHGEF7Q14155 803 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 MAP7Q14244 749 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 NR1D2Q14995 579 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 IL17AQ16552 155 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 UGT8Q16880 541 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ARSJQ5FYB0 599 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 MPP7Q5T2T1 576 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM69BQ5VUD6 431 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM46CQ5VWP2 391 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 FOXR2Q6PJQ5 311 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 CCDC186Q7Z3E2 898 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ACOT1Q86TX2 421 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 SLC47A2Q86VL8 602 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 C17orf82Q86X59 251 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 CHST14Q8NCH0 376 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 OR4D9Q8NGE8 314 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 CCL4L1Q8NHW4 92 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 GRHL3Q8TE85 626 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 CT55Q8WUE5 264 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 OR8D1Q8WZ84 308 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 LENG8Q96PV6 779 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 TEFMQ96QE5 360 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ACTL8Q9H568 366 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 ACSS2Q9NR19 701 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 INTS13Q9NVM9 706 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 PDP2Q9P2J9 529 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 USP25Q9UHP3 1055 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 DNM3Q9UQ16 869 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 FADS3Q9Y5Q0 445 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 MGAM2Q2M2H8 2515 aa6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-216ENST00000519489 A8MU76 341 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 B4DGG1 531 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 FPGTO14772 594 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 GNB5O14775 395 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 INPP4BO15327 924 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 NUDT21O43809 227 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 PHACTR2O75167 634 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 RECKO95980 971 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 EDN3P14138 238 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ADH6P28332 368 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ADSLP30566 484 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 EIF4A3P38919 411 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 GLRBP48167 497 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 KRT83P78385 493 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 DNM1Q05193 864 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 NCOA4Q13772 614 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 LLGL1Q15334 1064 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ELOCQ15369 112 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ZNF174Q15697 407 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 C6orf15Q6UXA7 325 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 MACC1Q6ZN28 852 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ARHGAP22Q7Z5H3 698 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM186BQ8IYM0 893 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ULK2Q8IYT8 1036 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms