RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CWC15Q9P013 229 aaKnown RBP6.13□□□□□ -1.43
SQLE-203ENST00000518931 NDUFAF4Q9P032 175 aa6.13□□□□□ -1.43
SQLE-203ENST00000518931 AURKCQ9UQB9 309 aa6.13□□□□□ -1.43
SQLE-203ENST00000518931 WDR37Q9Y2I8 494 aa6.13□□□□□ -1.43
SQLE-203ENST00000518931 ZCCHC6Q5VYS8 1495 aaKnown RBP6.13□□□□□ -1.43
SQLE-203ENST00000518931 OR2W5A6NFC9 320 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 LINC01548A6NM66 108 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 OVOL3O00110 214 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 KIF2AO00139 706 aaPredicted RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 CBFA2T3O75081 653 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 PEX11AO75192 247 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 GGPS1O95749 300 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 OLFM2O95897 454 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 PAHP00439 452 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 DRD1P21728 446 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 NFKBIAP25963 317 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 LMAN1P49257 510 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 DGKQP52824 942 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 TXNL4AP83876 142 aaKnown RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 CFHR3Q02985 330 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 GBE1Q04446 702 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 RPA4Q13156 261 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 FAM187BQ17R55 369 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 AASDHQ4L235 1098 aaPredicted RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 XKR9Q5GH70 373 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 TMEM196Q5HYL7 178 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 GARNL3Q5VVW2 1013 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 KRT80Q6KB66 452 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 ATF7IPQ6VMQ6 1270 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 PPP1R21Q6ZMI0 780 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 FAM83HQ6ZRV2 1179 aaPredicted RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 CHST3Q7LGC8 479 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 GLRX5Q86SX6 157 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 TMEM200AQ86VY9 491 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 RASGRP3Q8IV61 690 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 Q8NFD4 153 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 OR6Y1Q8NGX8 325 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 RFWD2Q8NHY2 731 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.12□□□□□ -1.43
SQLE-203ENST00000518931 EDC3Q96F86 508 aaKnown RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 SIPA1Q96FS4 1042 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 RITA1Q96K30 269 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 HS6ST2Q96MM7 605 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 FYTTD1Q96QD9 318 aaKnown RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 TBCDQ9BTW9 1192 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 TEX12Q9BXU0 123 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 SLC7A5P2Q9GIP4 190 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 SAP30LQ9HAJ7 183 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 POLE3Q9NRF9 147 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 DDX18Q9NVP1 670 aaKnown RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 NMRK1Q9NWW6 199 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 QPCTLQ9NXS2 382 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 IL19Q9UHD0 177 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 PSAT1Q9Y617 370 aa6.12□□□□□ -1.43
SQLE-203ENST00000518931 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.12□□□□□ -1.43
SQLE-203ENST00000518931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.11□□□□□ -1.43
SQLE-203ENST00000518931 GPR89AB7ZAQ6 455 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 BTBD19C9JJ37 291 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 UBE2Q2LH0YL09 131 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 L7N2F9 121 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 PIP5K1BO14986 540 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 SLITRK3O94933 977 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 CCNDBP1O95273 360 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 GPR89BP0CG08 455 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 SOX6P35712 828 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 ACAA2P42765 397 aaKnown RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 PAFAH1B1P43034 410 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 CCT4P50991 539 aaKnown RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 HDAC4P56524 1084 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 YBEYP58557 167 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 GPC5P78333 572 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 C17orf67Q0P5P2 114 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 GALNT2Q10471 571 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 KIF5AQ12840 1032 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 BFSP2Q13515 415 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 DNASE1L3Q13609 305 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 CUL2Q13617 745 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 KCNJ12Q14500 433 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 MXD4Q14582 209 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 SEC23BQ15437 767 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 INAQ16352 499 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 IMMTQ16891 758 aaKnown RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 C15orf59Q2T9L4 293 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 P3H1Q32P28 736 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 PLEKHS1Q5SXH7 462 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 TPGS2Q68CL5 300 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 TMEM65Q6PI78 240 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 MON1AQ86VX9 555 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 SPATA2LQ8IUW3 424 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 PEX5LQ8IYB4 626 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 CCDC13Q8IYE1 715 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 DCLK2Q8N568 766 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 LINC01465Q8N7H1 131 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 USP38Q8NB14 1042 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 OR52K1Q8NGK4 314 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 RMDN1Q96DB5 314 aa6.11□□□□□ -1.43
SQLE-203ENST00000518931 KTI12Q96EK9 354 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 PGAP3Q96FM1 320 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 CINPQ9BW66 212 aaPredicted RBP6.11□□□□□ -1.43
SQLE-203ENST00000518931 BRD8Q9H0E9 1235 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms