RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CYP1A2P05177 515 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 SPARCP09486 303 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 TFPIP10646 304 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 LAMP2P13473 410 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 CDH2P19022 906 aaPredicted RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 CHATP28329 748 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 CDAP32320 146 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 EFNA5P52803 228 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 RPS3AP61247 264 aaKnown RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 OLR1P78380 273 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 SETQ01105 290 aaPredicted RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 MAMLD1Q13495 774 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 CAPSQ13938 189 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 GPR18Q14330 331 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 HSPB2Q16082 182 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 TCTN1Q2MV58 587 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 LEXMQ3ZCV2 418 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 DNTTIP2Q5QJE6 756 aaKnown RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 CCDC30Q5VVM6 783 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 CES5AQ6NT32 575 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 MON1BQ7L1V2 547 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 SFTPA2Q8IWL1 248 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 SMARCE1Q969G3 411 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 FBXL8Q96CD0 374 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 ZC3HAV1LQ96H79 300 aaKnown RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 BBS4Q96RK4 519 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 PIP5K1AQ99755 562 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 MXRA8Q9BRK3 442 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 MSTO1Q9BUK6 570 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 STRA6Q9BX79 667 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 POLDIP3Q9BY77 421 aaKnown RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 GLIS2Q9BZE0 524 aaPredicted RBP4.67□□□□□ -1.66
SQLE-202ENST00000518604 PLAC1Q9HBJ0 212 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 ASAH2Q9NR71 780 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 TBC1D22BQ9NU19 505 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 PSAT1Q9Y617 370 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 A3GALT2U3KPV4 340 aa4.67□□□□□ -1.66
SQLE-202ENST00000518604 EIF3CLB5ME19 914 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 NPIPB11E5RHQ5 1161 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 H0YGN5 161 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 SEC14L5O43304 696 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 ATP2C2O75185 946 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 CD58P19256 250 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 AGAP20933 346 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 ARL3P36405 182 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 RGS2P41220 211 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 RFX2P48378 723 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 CXCR3P49682 368 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 CLCN5P51795 746 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 CLNS1AP54105 237 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 P2RX3P56373 397 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 HDAC4P56524 1084 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 ROR2Q01974 943 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 ITGADQ13349 1161 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 OLIG2Q13516 323 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 EIF4A2Q14240 407 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 ERV3-1Q14264 604 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 ARHGEF6Q15052 776 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 SOWAHAQ2M3V2 549 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 DPCR1Q3MIW9 517 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 ESCO2Q56NI9 601 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 PRAMEF19Q5SWL8 479 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 MZT2BQ6NZ67 158 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 IRF2BP2Q7Z5L9 587 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 ZCCHC9Q8N567 271 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 INTS12Q96CB8 462 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 URB1-AS1Q96HZ7 61 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 FCRL4Q96PJ5 515 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 SLITRK1Q96PX8 696 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 MUC13Q9H3R2 512 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 KRT84Q9NSB2 600 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 EHD2Q9NZN4 543 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 LIMA1Q9UHB6 759 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 INTS6Q9UL03 887 aaKnown RBP4.66□□□□□ -1.66
SQLE-202ENST00000518604 NFE2L3Q9Y4A8 694 aa4.66□□□□□ -1.66
SQLE-202ENST00000518604 B4DGG1 531 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 H3BNX3 289 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 INO80B-WBP1J3KQ70 363 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 ASAP2O43150 1006 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 SPRY3O43610 288 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 LDB2O43679 373 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 KLK8O60259 260 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 RNASEH2AO75792 299 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 SEC31AO94979 1220 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 SOX30O94993 753 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 NDUFB4O95168 129 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 MMP2P08253 660 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 ACADMP11310 421 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 GPTP24298 496 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 ICAM3P32942 547 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 PGGT1BP53609 377 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 ARF3P61204 181 aaPredicted RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 ARF1P84077 181 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 PPATQ06203 517 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 GOLGA8DPQ0D2H9 430 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 LMOD3Q0VAK6 560 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 TMEM115Q12893 351 aaPredicted RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 KRT24Q2M2I5 525 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 KLHL24Q6TFL4 600 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 Q6ZTK2 550 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms