RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 LRRC73Q5JTD7 316 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 INO80CQ6PI98 192 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 MACC1Q6ZN28 852 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 CLEC14AQ86T13 490 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 VPS36Q86VN1 386 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 PYROXD2Q8N2H3 581 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 MSANTD4Q8NCY6 345 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 SLC30A5Q8TAD4 765 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 GLMNQ92990 594 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 NTAN1Q96AB6 310 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 TBC1D31Q96DN5 1066 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 ARHGEF26Q96DR7 871 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 PCDHB18PQ96TA0 734 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 CCDC3Q9BQI4 270 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 C11orf70Q9BRQ4 267 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 CLSTN2Q9H4D0 955 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 PADI4Q9UM07 663 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 TDRD6O60522 2096 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 RP1P56715 2156 aa8.45□□□□□ -1.06
CTNNA1-203ENST00000517534 TSPAN11A1L157 253 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 CAPN8A6NHC0 703 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 WASH4PA8MWX3 477 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 EPHB6O15197 1021 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 MAP3K7O43318 606 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 TNFSF15O95150 251 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 ANXA6P08133 673 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 KRT3P12035 628 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 PEX5P50542 639 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 HK3P52790 923 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 THOP1P52888 689 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 GSCP56915 257 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 PPARDQ03181 441 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 LY6DQ14210 128 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 IRF4Q15306 451 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 ALG11Q2TAA5 492 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 FAXCQ5TGI0 409 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 KCTD16Q68DU8 428 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 WDR59Q6PJI9 974 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 RTL3Q8N8U3 475 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 WDR36Q8NI36 951 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 WDR48Q8TAF3 677 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 CXorf40AQ8TE69 158 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 FAM172AQ8WUF8 416 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 CASKIN2Q8WXE0 1202 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 NAT6Q93015 286 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 TSACCQ96A04 125 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 HMCESQ96FZ2 354 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 GDAP1L1Q96MZ0 367 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 EPAS1Q99814 870 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 WRAP53Q9BUR4 548 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 EDEM3Q9BZQ6 932 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 SLC13A1Q9BZW2 595 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 LHX3Q9UBR4 397 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 HPCAL4Q9UM19 191 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 COQ6Q9Y2Z9 468 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 PCDHGA10Q9Y5H3 936 aa8.44□□□□□ -1.06
CTNNA1-203ENST00000517534 COL27A1Q8IZC6 1860 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 CCDC187A0A096LP49 1063 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 A0A1W2PQM1 296 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 TCRBV5S1A1TA0A578 114 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 SIGLEC16A6NMB1 481 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 B8ZZF3 427 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 RASA4BC9J798 803 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 J3QKU1 62 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 PES1O00541 588 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 RASA4O43374 803 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 NOBOXO60393 691 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 IGSF6O95976 241 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 EEF1GP26641 437 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 EPHB2P29323 1055 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 SOX5P35711 763 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 BLKP51451 505 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 SUOXP51687 545 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 YBEYP58557 167 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 RHOAP61586 193 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 RAD51Q06609 339 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 AGERQ15109 404 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 CT47A1Q5JQC4 288 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 KIAA1614Q5VZ46 1190 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 ESRP1Q6NXG1 681 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 LVRNQ6Q4G3 990 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 SLFN11Q7Z7L1 901 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 B3GNT8Q7Z7M8 397 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 ZSWIM9Q86XI8 627 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 PHF13Q86YI8 300 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 UMODL1-AS1Q8N2C9 162 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 FSTL5Q8N475 847 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 ARL14Q8N4G2 192 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 ARL10Q8N8L6 244 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 HCAR2Q8TDS4 363 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 FUBP1Q96AE4 644 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 LIN37Q96GY3 246 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 C1QTNF7Q9BXJ2 289 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 CPEB1Q9BZB8 566 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 VPS16Q9H269 839 aa8.43□□□□□ -1.06
CTNNA1-203ENST00000517534 SUV39H2Q9H5I1 410 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms