RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PRKCZQ05513 592 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 CRHR2Q13324 411 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 FRG1Q14331 258 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF605Q86T29 641 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ADHFE1Q8IWW8 467 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ARMC7Q9H6L4 198 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 LIMD1Q9UGP4 676 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 RAB26Q9ULW5 256 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 PADI3Q9ULW8 664 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 A8MUI8 341 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 TMCC2O75069 709 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 STX11O75558 287 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZBTB11O95625 1053 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 GUCA1AP43080 201 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 BRMS1LQ5PSV4 323 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 PLPP4Q5VZY2 271 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 TMEM110Q86TL2 294 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 EMC1Q8N766 993 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 BPIFB6Q8NFQ5 453 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 FIG4Q92562 907 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 PHACTR1Q9C0D0 580 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 KRCC1Q9NPI7 259 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 BAIAP2Q9UQB8 552 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ABHD14A-ACY1A0A1B0GW23 586 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 SERPINA6P08185 405 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 COL6A1P12109 1028 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 HPGDP15428 266 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 TKTP29401 623 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 SLC9A5Q14940 896 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 TSC22D1Q15714 1073 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 KLHL35Q6PF15 583 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 UTS2BQ765I0 119 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZBTB45Q96K62 511 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 BLOC1S4Q9NUP1 217 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 NUDT5Q9UKK9 219 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 XRN1Q8IZH2 1706 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CATP04040 527 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 DNTTP04053 509 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 ITGB6P18564 788 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 SLC16A1P53985 500 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 TNK2Q07912 1038 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 AAK1Q2M2I8 961 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 GALNTL6Q49A17 601 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 SLCO6A1Q86UG4 719 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 RBM12BQ8IXT5 1001 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 FAM47BQ8NA70 645 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 HTRA1Q92743 480 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 TKTL2Q9H0I9 626 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 DEC1Q9P2X7 70 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 MYL12BO14950 172 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CLTBP09497 229 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 GPC1P35052 558 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 RXRGP48443 463 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 DPYSQ14117 519 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 MZT2AQ6P582 158 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 TFAP2DQ7Z6R9 452 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CYP4Z1Q86W10 505 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CCDC36Q8IYA8 594 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 HEXDCQ8WVB3 486 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 MRPL48Q96GC5 212 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 GPATCH2LQ9NWQ4 482 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 RGSL1A5PLK6 1076 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 USP39Q53GS9 565 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 C2CD6Q53TS8 623 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 LLGL2Q6P1M3 1020 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 FAM228AQ86W67 206 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 RAB43Q86YS6 212 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 C12orf56Q8IXR9 622 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 TEKT5Q96M29 485 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 QRFPRQ96P65 431 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZYG11BQ9C0D3 744 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CCNB1IP1Q9NPC3 277 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 CCDC167Q9P0B6 97 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 AP3M1Q9Y2T2 418 aa12.33□□□□□ -0.44
PCDHGA6-201ENST00000517434 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 SIN3BO75182 1162 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 SOAT1P35610 550 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 ACLYP53396 1101 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 PSME3P61289 254 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 LYPLAL1Q5VWZ2 237 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 HLA-DQA1Q5Y7H0 255 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZCCHC23Q6ZST2 131 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 UBE2Q1Q7Z7E8 422 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
PCDHGA6-201ENST00000517434 UBE2E3Q969T4 207 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms