RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 UHRF1Q96T88 793 aaPredicted RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 OMDQ99983 421 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MGME1Q9BQP7 344 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 RTKNQ9BST9 563 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 THTPAQ9BU02 230 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TUBB6Q9BUF5 446 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CCDC28BQ9BUN5 200 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TTLL2Q9BWV7 592 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SHCBP1LQ9BZQ2 653 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TRPV6Q9H1D0 765 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC25A51Q9H1U9 297 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MRPL46Q9H2W6 279 aaKnown RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MFSD1Q9H3U5 465 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 EBF3Q9H4W6 596 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 POMKQ9H5K3 350 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FAM96AQ9H5X1 160 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 WDR55Q9H6Y2 383 aaPredicted RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SUDS3Q9H7L9 328 aaPredicted RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 COG4Q9H9E3 785 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MEAF6Q9HAF1 191 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SP110Q9HB58 689 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PIDD1Q9HB75 910 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NMRAL1Q9HBL8 299 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZBTB26Q9HCK0 441 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 S100A14Q9HCY8 104 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NMRK2Q9NPI5 230 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC52A3Q9NQ40 469 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TCF7L2Q9NQB0 619 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 C20orf96Q9NUD7 363 aaPredicted RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TRMT13Q9NUP7 481 aaKnown RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TBC1D13Q9NVG8 400 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NDE1Q9NXR1 346 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NSMCE4AQ9NXX6 385 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 UBP1Q9NZI7 540 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MPP6Q9NZW5 540 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CPSF2Q9P2I0 782 aaKnown RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SUCOQ9UBS9 1254 aaKnown RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 STK39Q9UEW8 545 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DCDC2Q9UHG0 476 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SFMBT1Q9UHJ3 866 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MID2Q9UJV3 735 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FBXO5Q9UKT4 447 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ANGPTL2Q9UKU9 493 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PRPF19Q9UMS4 504 aaKnown RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PCDHGB4Q9UN71 923 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SCML2Q9UQR0 700 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NOD1Q9Y239 953 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TLR6Q9Y2C9 796 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PCDHGB5Q9Y5G0 923 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PCDHGA7Q9Y5G6 932 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CDY1Q9Y6F8 540 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SQORQ9Y6N5 450 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 EML5Q05BV3 1969 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MYO7AQ13402 2215 aa3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 COL5A1P20908 1838 aaPredicted RBP3.28□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NUMA1Q14980 2115 aa3.28□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PDE4DIPQ5VU43 2346 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 A0A087X1B8 175 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 C15orf38-AP3S2A0A0A6YYH1 394 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TCRBV3S1A0A5B6 114 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 EME2A4GXA9 379 aaPredicted RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OR51F1A6NGY5 319 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DRGXA6NNA5 263 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 STX16-NPEPL1H3BU86 382 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DFFAO00273 331 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CCL22O00626 93 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 NRG2O14511 850 aaPredicted RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 NEMP1O14524 444 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 GAPDHSO14556 408 aaPredicted RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TNPO2O14787 897 aaKnown RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SLC7A4O43246 635 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 KIF1CO43896 1103 aaKnown RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PEX1O43933 1283 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PRAMEF11O60813 436 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TRIM13O60858 407 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 FKBP6O75344 327 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PMPCBO75439 489 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SOAT2O75908 522 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 B3GAT3O94766 335 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 KLHL2O95198 593 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 HSPA4LO95757 839 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CD160O95971 181 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 S1PR4O95977 384 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 POMCP01189 267 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 F11P03951 625 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 RPLP2P05387 115 aaKnown RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 FESP07332 822 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LYNP07948 512 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PDHA1P08559 390 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 RPS17P08708 135 aaKnown RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SPATA31D3P0C874 917 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CKBP12277 381 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 RHOQP17081 205 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 HDCP19113 662 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OGNP20774 298 aaKnown RBP3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ATP6V1B2P21281 511 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 FGFR3P22607 806 aa3.27□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ATP5F1P24539 256 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms