RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 LAMTOR5O43504 91 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SYNCRIPO60506 623 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SNAP91O60641 907 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RAMP2O60895 175 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PPM1BO75688 479 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TIAF1O95411 115 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 KRT1P04264 644 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 S100BP04271 92 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CD48P09326 243 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HOXB4P17483 251 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CD247P20963 164 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 GLDCP23378 1020 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 KDELR1P24390 212 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 IL4RP24394 825 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 NTSR1P30989 418 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HTR7P34969 479 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MAGEA9P43362 315 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 KIR2DL1P43626 348 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RPS9P46781 194 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HCAR3P49019 387 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MAPKAPK2P49137 400 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PLK1P53350 603 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ST8SIA6P61647 398 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ECT2LQ008S8 904 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CSTF1Q05048 431 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SULT2A1Q06520 285 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SEMA3BQ13214 749 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 DMC1Q14565 340 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ZNF234Q14588 700 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 EIF4HQ15056 248 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 E2F5Q15329 346 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 LLGL1Q15334 1064 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 DPYSL2Q16555 572 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 FUT11Q495W5 492 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ACCSLQ4AC99 568 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 EOGTQ5NDL2 527 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MANEALQ5VSG8 457 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 LRRC38Q5VT99 294 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TMEM215Q68D42 235 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RETSATQ6NUM9 610 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PKN3Q6P5Z2 889 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ZNF783Q6ZMS7 281 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RFX8Q6ZV50 586 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CYP4V2Q6ZWL3 525 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TRMT11Q7Z4G4 463 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 NLRP14Q86W24 1093 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ZNF227Q86WZ6 799 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 C1orf210Q8IVY1 113 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RCOR2Q8IZ40 523 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SYCE1Q8N0S2 351 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SPEM1Q8N4L4 309 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RTL3Q8N8U3 475 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 IL17RCQ8NAC3 791 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 NETO2Q8NC67 525 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 BVESQ8NE79 360 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 OR7D4Q8NG98 312 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 OR52K2Q8NGK3 314 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TTC17Q96AE7 1141 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CELF6Q96J87 481 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RPL10LQ96L21 214 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CSPG4P5Q96PW8 444 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ACOX2Q99424 681 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 FAM126AQ9BYI3 521 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 MKRN2Q9H000 416 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 KCNF1Q9H3M0 494 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PCDH18Q9HCL0 1135 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TMEM248Q9NWD8 314 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 TRMT1Q9NXH9 659 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 THAP10Q9P2Z0 257 aaPredicted RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SLCO3A1Q9UIG8 710 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SLC25A13Q9UJS0 675 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PCOLCE2Q9UKZ9 415 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HPCAL4Q9UM19 191 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 G3BP2Q9UN86 482 aaKnown RBP5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ERVW-1Q9UQF0 538 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ACTL7BQ9Y614 415 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 STON1Q9Y6Q2 735 aa5.92□□□□□ -1.46
SCARNA6.1-201ENST00000516989 CCDC66A2RUB6 948 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ARHGAP42A6NI28 874 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RASA4BC9J798 803 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 DFFAO00273 331 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 NPC1O15118 1278 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 RASA4O43374 803 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 PSTPIP1O43586 416 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ADAM23O75077 832 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ZRANB2O95218 330 aaKnown RBP eCLIP5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 FTCDO95954 541 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ASLP04424 464 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 SRPRAP08240 638 aaKnown RBP5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 DLDP09622 509 aaKnown RBP5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HLA-EP13747 358 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HOXB2P14652 356 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HNRNPLP14866 589 aaKnown RBP eCLIP5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 HOXC13P31276 330 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 ACVRL1P37023 503 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 IL12RB1P42701 662 aa5.91□□□□□ -1.46
SCARNA6.1-201ENST00000516989 STK19P49842 368 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms