RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PCNAP12004 261 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SERPINB3P29508 390 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CHAF1AQ13111 956 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 DMP1Q13316 513 aaPredicted RBP2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ITGADQ13349 1161 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CUL4BQ13620 913 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 BRD3Q15059 726 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 RBBP5Q15291 538 aaKnown RBP2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SLC18A3Q16572 532 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FAM83BQ5T0W9 1011 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SYCP2LQ5T4T6 812 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ANKRD45Q5TZF3 282 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 IRAK1BP1Q5VVH5 260 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FOXL2NBQ6ZUU3 175 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 PRSS45Q7RTY3 260 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TMEM57Q8N5G2 664 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ARRDC2Q8TBH0 407 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CREB3L4Q8TEY5 395 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 GDPD5Q8WTR4 605 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 AFG1LQ8WV93 481 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TMEM170AQ8WVE7 144 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 RNFT2Q96EX2 444 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ZNF700Q9H0M5 742 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 MMP28Q9H239 520 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 EBF2Q9HAK2 575 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CYSLTR2Q9NS75 346 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SIX4Q9UIU6 781 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CD207Q9UJ71 328 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 POU2F3Q9UKI9 436 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 PCDHGB5Q9Y5G0 923 aa2.89□□□□□ -1.95
RNU6-1088P-201ENST00000516850 A0A0G2JPF8 293 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 HNRNPCL3B7ZW38 293 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 NPIPB11E5RHQ5 1161 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FAM72CH0Y354 149 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 C16orf97H3BN30 126 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 IPO5O00410 1097 aaKnown RBP2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 EBAG9O00559 213 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 HSPA12AO43301 675 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 HNRNPCL1O60812 293 aaKnown RBP2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 NDUFB4O95168 129 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CHRM4P08173 479 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 WEE2P0C1S8 567 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 HNRNPCL4P0DMR1 293 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 GM2AP17900 193 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CD72P21854 359 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 MCM3P25205 808 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 STX2P32856 288 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TTKP33981 857 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 YWHAZP63104 245 aaKnown RBP2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 NEDD9Q14511 834 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FBXO43Q4G163 708 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FAM72AQ5TYM5 149 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FAM69BQ5VUD6 431 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FAM72DQ6L9T8 149 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FAM72BQ86X60 149 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 IL17RCQ8NAC3 791 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 POF1BQ8WVV4 589 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 THAP4Q8WY91 577 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 FIG4Q92562 907 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TANKQ92844 425 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ZC3HAV1LQ96H79 300 aaKnown RBP2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 NOD2Q9HC29 1040 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TLR8Q9NR97 1041 aaKnown RBP2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ZNF224Q9NZL3 707 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SLC9A2Q9UBY0 812 aa2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 RRP7AQ9Y3A4 280 aaKnown RBP2.88□□□□□ -1.95
RNU6-1088P-201ENST00000516850 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 STX16-NPEPL1H3BU86 382 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 P2RY10O00398 339 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 STX16O14662 325 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 WNT9BO14905 357 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 DHX16O60231 1041 aaKnown RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ZIC3O60481 467 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SRCP12931 536 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 PTPN2P17706 415 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CD58P19256 250 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 RXRAP19793 462 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 GPTP24298 496 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ADD2P35612 726 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 PIGAP37287 484 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 BLKP51451 505 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ACTR2P61160 394 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ZNF155Q12901 538 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ZBTB17Q13105 803 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 PRKG1Q13976 671 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TRIM14Q14142 442 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ADCK5Q3MIX3 580 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 AMZ1Q400G9 498 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 ATP13A5Q4VNC0 1218 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 KRBA2Q6ZNG9 492 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SLC26A9Q7LBE3 791 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 SMIM29Q86T20 159 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CPXM2Q8N436 756 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 METTL27Q8N6F8 245 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 OR13A1Q8NGR1 328 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 NOC3LQ8WTT2 800 aaKnown RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CNOT9Q92600 299 aaKnown RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 USP13Q92995 863 aaPredicted RBP2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 TMEM19Q96HH6 336 aa2.87□□□□□ -1.95
RNU6-1088P-201ENST00000516850 CSF3RQ99062 836 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms