RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 CARD8Q9Y2G2 431 aa3.38□□□□□ -1.87
SCARNA15.2-201ENST00000516409 R3HDM2Q9Y2K5 976 aaKnown RBP3.38□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LOC102723996A0A087X1L8 192 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DDTLA6NHG4 134 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM157AC9JC47 383 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MITFO75030 526 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MT-CYBP00156 380 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CD63P08962 238 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM11P17152 192 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTPN2P17706 415 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRIM21P19474 475 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CHRNA5P30532 468 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HOXC13P31276 330 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SUOXP51687 545 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CLCN5P51795 746 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PNLIPRP2P54317 469 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DGCR2P98153 550 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ACSM2AQ08AH3 577 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GRAPQ13588 217 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ALCAMQ13740 583 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SNTB1Q13884 538 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 IL11RAQ14626 422 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LETM2Q2VYF4 491 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC92Q53HC0 331 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KIAA1755Q5JYT7 1200 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SPDYAQ5MJ70 313 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 VWA5B1Q5TIE3 1220 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM198Q66K66 360 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ACSM2BQ68CK6 577 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PMS2CLQ68D20 193 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CES5AQ6NT32 575 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRAT1Q6PIZ9 186 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FBXO46Q6PJ61 603 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SUSD1Q6UWL2 747 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SEPT14Q6ZU15 432 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CHST3Q7LGC8 479 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC186Q7Z3E2 898 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MRGPREQ86SM8 312 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HAPLN4Q86UW8 402 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZSCAN30Q86W11 494 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 UEVLDQ8IX04 471 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC170Q8IYT3 715 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MMP21Q8N119 569 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZCCHC9Q8N567 271 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CHST13Q8NET6 341 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 OR4N2Q8NGD1 307 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GSDMBQ8TAX9 411 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MGARPQ8TDB4 240 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM170AQ8WVE7 144 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HAS1Q92839 578 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LENG9Q96B70 501 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZC3HAV1LQ96H79 300 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TEPSINQ96N21 525 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FCRL5Q96RD9 977 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NAA11Q9BSU3 229 aaPredicted RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HGH1Q9BTY7 390 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TUBB6Q9BUF5 446 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BDH2Q9BUT1 245 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TM2D2Q9BX73 214 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MRPL1Q9BYD6 325 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 WDR6Q9NNW5 1121 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BPIFA1Q9NP55 256 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PAG1Q9NWQ8 432 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ANAPC2Q9UJX6 822 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PLAGL1Q9UM63 463 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LSM4Q9Y4Z0 139 aaKnown RBP3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MAST3O60307 1309 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 AOX1Q06278 1338 aa3.37□□□□□ -1.87
SCARNA15.2-201ENST00000516409 A0A1W2PR77 199 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SLC22A23A1A5C7 686 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BICDL2A1A5D9 508 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TYW5A2RUC4 315 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC151A5D8V7 595 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LRRC72A6NJI9 287 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 A6NL46 340 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KLRF2D3W0D1 207 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 EBAG9O00559 213 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ATP2C2O75185 946 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 AVILO75366 819 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TADA2AO75478 443 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SLCO2B1O94956 709 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C8AP07357 584 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HNRNPCP07910 306 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HOXB5P09067 269 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC175P0C221 793 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HKR1P10072 659 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MMP9P14780 707 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF182P17025 639 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CTPS1P17812 591 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TACR2P21452 398 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTAFRP25105 342 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 YWHAQP27348 245 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ATP5DP30049 168 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HOXA13P31271 388 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MC5RP33032 325 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SHMT1P34896 483 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RYKP34925 604 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTGER1P34995 402 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTGS2P35354 604 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms