RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PCDHA1Q9Y5I3 950 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGLV5-45A0A087WSX0 123 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 CTAGE9A4FU28 777 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 SH2D7A6NKC9 451 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KPNA7A9QM74 516 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KLF11O14901 512 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 RGS10O43665 173 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 NDUFS7O75251 213 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 LRCH4O75427 683 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 RASAL1O95294 804 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGHV4-39P01824 125 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 THY1P04216 161 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 CTAGE8P0CG41 777 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 MATN1P21941 496 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KLRC2P26717 231 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGHMBP2P38935 993 aaKnown RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 MAPK9P45984 424 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 EFNA5P52803 228 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGLV3-21P80748 117 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 TMPRSS15P98073 1019 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KLF1Q13351 362 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KIR2DS3Q14952 304 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KRTAP6-1Q3LI64 71 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 PLK5Q496M5 336 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 Q5W150 140 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZDHHC24Q6UX98 284 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ANO5Q75V66 913 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 DPP9Q86TI2 863 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGFN1Q86VF2 1251 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 CTAGE4Q8IX94 777 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC15A4Q8N697 577 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 CELF5Q8N6W0 485 aaKnown RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZSWIM2Q8NEG5 633 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 CREB3L4Q8TEY5 395 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 TMEM18Q96B42 140 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ARHGEF26Q96DR7 871 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 GAL3ST4Q96RP7 486 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 JPH2Q9BR39 696 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 NPFFR1Q9GZQ6 430 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 PLEKHA3Q9HB20 300 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF277Q9NRM2 450 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 C1RLQ9NZP8 487 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 RPS6KB2Q9UBS0 482 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ABCF2Q9UG63 623 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 KCNJ14Q9UNX9 436 aa-0.72□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF407Q9C0G0 2248 aa-0.72□□□□□ -2.53
RNU6-542P-201ENST00000516405 IGKV2-28A0A075B6P5 120 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 A0A087WW49 117 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 CCDC154A6NI56 674 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 KCNJ18B7U540 433 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 SLCO1B7G3V0H7 640 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TBX3O15119 743 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 SLC22A2O15244 555 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 IDH3BO43837 385 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 RFPL2O75678 378 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 IL18RAPO95256 599 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 EML2O95834 649 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 HPRP00739 348 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 IGKV2D-28P01615 120 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 RAF1P04049 648 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 CKMT1AP12532 417 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 AGXTP21549 392 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 CHRNA5P30532 468 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 PBX1P40424 430 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 MMP14P50281 582 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 ZNF136P52737 540 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 SLC37A1P57057 533 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 SESN3P58005 492 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 DRP2Q13474 957 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 CLCA4Q14CN2 919 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 MFSD6Q6ZSS7 791 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 MDGA2Q7Z553 956 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 PATL1Q86TB9 770 aaKnown RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 ADAMTSL2Q86TH1 951 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TSPAN33Q86UF1 283 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 RBFAQ8N0V3 343 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 ABHD12Q8N2K0 398 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TMEM217Q8N7C4 229 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 POC5Q8NA72 575 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 C3orf20Q8ND61 904 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 ABCF1Q8NE71 845 aaKnown RBP eCLIP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 RHOXF1Q8NHV9 184 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 PARD3BQ8TEW8 1205 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 RNF138Q8WVD3 245 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TRIB2Q92519 343 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 MKL1Q969V6 931 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 SGF29Q96ES7 293 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 CDCA5Q96FF9 252 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TNIP3Q96KP6 325 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 ADAD1Q96M93 576 aaKnown RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 NSMCE3Q96MG7 304 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 LRFN5Q96NI6 719 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 P2RX7Q99572 595 aaKnown RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TGIF2Q9GZN2 237 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 MS4A7Q9GZW8 240 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 IKZF5Q9H5V7 419 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 XPO5Q9HAV4 1204 aaKnown RBP eCLIP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 SIX2Q9NPC8 291 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 XPNPEP3Q9NQH7 507 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TMEM30AQ9NV96 361 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms