RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PTPRHQ9HD43 1115 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 MALT1Q9UDY8 824 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 SUFUQ9UMX1 484 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 RRP7AQ9Y3A4 280 aaKnown RBP4.02□□□□□ -1.77
LINC01088-211ENST00000515597 ADGRF5Q8IZF2 1346 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 CBY3A6NI87 242 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 FAM90A7PA6NKC0 464 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 FAM90A22PA8MWA6 464 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 FAM90A12PA8MX19 464 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 FAM90A23PA8MXZ1 464 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 J3KR12 359 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 IRAK2O43187 625 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 CH25HO95992 272 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 RXRAP19793 462 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 RYKP34925 604 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 LIFRP42702 1097 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 MYBPHQ13203 477 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 XKR9Q5GH70 373 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 FAM69BQ5VUD6 431 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 ZNF449Q6P9G9 518 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 PRSS45Q7RTY3 260 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 RAB40AQ8WXH6 277 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 IL17FQ96PD4 163 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 PSMD1Q99460 953 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 HERPUD2Q9BSE4 406 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 STN1Q9H668 368 aaKnown RBP4.01□□□□□ -1.77
LINC01088-211ENST00000515597 OR6C3Q9NZP0 311 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 NFS1Q9Y697 457 aa4.01□□□□□ -1.77
LINC01088-211ENST00000515597 SAA2-SAA4A0A096LPE2 208 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 C17orf113A0A1B0GUU1 675 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 VWA3AA6NCI4 1184 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 NPIPB11E5RHQ5 1161 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 WNT9BO14905 357 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 ANP32CO43423 234 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 NBNO60934 754 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 DHRS4L1P0CG22 281 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 IGHV4-30-4P0DP06 118 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 PEX5P50542 639 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 BLKP51451 505 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 ARL4CP56559 192 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 ECT2LQ008S8 904 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 DLG1Q12959 904 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 RBM39Q14498 530 aaKnown RBP4□□□□□ -1.77
LINC01088-211ENST00000515597 ANKRD1Q15327 319 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 TAF5Q15542 800 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 SETMARQ53H47 684 aaPredicted RBP4□□□□□ -1.77
LINC01088-211ENST00000515597 STPG1Q5TH74 334 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 ANKRD45Q5TZF3 282 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 SMIM29Q86T20 159 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 SUGP1Q8IWZ8 645 aaKnown RBP4□□□□□ -1.77
LINC01088-211ENST00000515597 CCDC105Q8IYK2 499 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 BICD1Q96G01 975 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 LRFN5Q96NI6 719 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 MMTAG2Q9BU76 263 aaKnown RBP4□□□□□ -1.77
LINC01088-211ENST00000515597 NDRG3Q9UGV2 375 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 PAM16Q9Y3D7 125 aa4□□□□□ -1.77
LINC01088-211ENST00000515597 MRC2Q9UBG0 1479 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 SH2D7A6NKC9 451 aaPredicted RBP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 LMX1BO60663 402 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GAGE7O76087 117 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 WEE2P0C1S8 567 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GAGE12FP0CL80 117 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GAGE12GP0CL81 117 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GAGE12IP0CL82 117 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 SRD5A1P18405 259 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 CXCR3P49682 368 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 PAPOLAP51003 745 aaKnown RBP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 TBL3Q12788 808 aaKnown RBP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GAGE1Q13065 139 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GAGE4Q13068 117 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 DHX34Q14147 1143 aaKnown RBP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 RHBDF2Q6PJF5 856 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 CHD1LQ86WJ1 897 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 C2CD5Q86YS7 1000 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 PGBD5Q8N414 524 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 CPXM2Q8N436 756 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 NKAPQ8N5F7 415 aaKnown RBP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 POC1AQ8NBT0 407 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 ARRDC2Q8TBH0 407 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 GDPD5Q8WTR4 605 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 CNOT9Q92600 299 aaKnown RBP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 WBP2Q969T9 261 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 SCMH1Q96GD3 660 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 ISCA1Q9BUE6 129 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.99□□□□□ -1.77
LINC01088-211ENST00000515597 PPCSQ9HAB8 311 aa3.99□□□□□ -1.77
LINC01088-211ENST00000515597 CPED1A4D0V7 1026 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 MAGEA13PA6NCF6 341 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 PRAC2D3DTV9 90 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 PEX12O00623 359 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 PER2O15055 1255 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 XPNPEP2O43895 674 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 ZNF8P17098 575 aaPredicted RBP3.98□□□□□ -1.77
LINC01088-211ENST00000515597 ARL16Q0P5N6 197 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 FBXO47Q5MNV8 452 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 CEP85LQ5SZL2 805 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 C17orf99Q6UX52 265 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 ANKRD42Q8N9B4 389 aa3.98□□□□□ -1.77
LINC01088-211ENST00000515597 SNAPC3Q92966 411 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms