RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 AQP9O43315 295 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 ITIH2P19823 946 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 HTR1BP28222 390 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 SSR1P43307 286 aaKnown RBP13.79□□□□□ -0.2
TCOF1-215ENST00000515516 CLDN6P56747 220 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 POLR2LP62875 67 aaKnown RBP13.79□□□□□ -0.2
TCOF1-215ENST00000515516 BCL2L1Q07817 233 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCOF1-215ENST00000515516 FAXCQ5TGI0 409 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 TMCO4Q5TGY1 634 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 AFMIDQ63HM1 303 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 ZCCHC8Q6NZY4 707 aaKnown RBP13.79□□□□□ -0.2
TCOF1-215ENST00000515516 TMCO3Q6UWJ1 677 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 CACTIN-AS1Q8N1I8 211 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 BBS5Q8N3I7 341 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 FAM181AQ8N9Y4 354 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 TSEN2Q8NCE0 465 aaKnown RBP13.79□□□□□ -0.2
TCOF1-215ENST00000515516 NSMCE1Q8WV22 266 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCOF1-215ENST00000515516 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
TCOF1-215ENST00000515516 CABIN1Q9Y6J0 2220 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 TSPAN11A1L157 253 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 MYO1FO00160 1098 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 BUB1BO60566 1050 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 NEBLO76041 1014 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 MT-CO3P00414 261 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 IGFALSP35858 605 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 EIF4A3P38919 411 aaKnown RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 RPIAP49247 311 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 PEX5P50542 639 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 SCNN1BP51168 640 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 BLKP51451 505 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 INSM1Q01101 510 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 PPARDQ03181 441 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 DPYSQ14117 519 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 KRT81Q14533 505 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 ZNF235Q14590 738 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 LBRQ14739 615 aaKnown RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 DPYSL2Q16555 572 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 SMTNL2Q2TAL5 461 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 CCDC122Q5T0U0 273 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 HGSNATQ68CP4 663 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 C19orf48Q6RUI8 117 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 PHACTR4Q8IZ21 702 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 TP53I13Q8NBR0 393 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 ATL2Q8NHH9 583 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 RFFLQ8WZ73 363 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 VOPP1Q96AW1 172 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 ZNF599Q96NL3 588 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 NUP85Q9BW27 656 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 NRSN2Q9GZP1 204 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 THAP2Q9H0W7 228 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 MBNL1Q9NR56 388 aaKnown RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 APOBEC3BQ9UH17 382 aaKnown RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 DOLKQ9UPQ8 538 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.25e-7■■■□□ 16.4
TCOF1-215ENST00000515516 COL5A1P20908 1838 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-215ENST00000515516 TMEM131Q92545 1883 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 IGF2RP11717 2491 aa13.78□□□□□ -0.2
TCOF1-215ENST00000515516 FRYQ5TBA9 3013 aa13.77□□□□□ -0.2
TCOF1-215ENST00000515516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 TPP1O14773 563 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 GP1BAP07359 652 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 ANXA6P08133 673 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 GIMD1P0DJR0 217 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 C6P13671 934 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 CTSEP14091 401 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 AMPD1P23109 780 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 NFKBIAP25963 317 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 IL1R2P27930 398 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 SERPINB6P35237 376 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 HSPA9P38646 679 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 PBX1P40424 430 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 LIG3P49916 1009 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 AP1S1P61966 158 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 SEMG2Q02383 582 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 EIF2B5Q13144 721 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 IRF4Q15306 451 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 NR0B2Q15466 257 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 HADHQ16836 314 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 PRRT3Q5FWE3 981 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 MACC1Q6ZN28 852 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 CYP4V2Q6ZWL3 525 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 POLNQ7Z5Q5 900 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 NPWQ8N729 165 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 IFI44Q8TCB0 444 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 MAPK15Q8TD08 544 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 HNRNPLLQ8WVV9 542 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms