RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SPATA6Q9NWH7 488 aaPredicted RBP21.16■□□□□ 0.98
LSM6-207ENST00000515311 UTP11Q9Y3A2 253 aaKnown RBP21.16■□□□□ 0.98
LSM6-207ENST00000515311 EFCAB8A8MWE9 144 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 NDC80O14777 642 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 MID1O15344 667 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 SUN1O94901 812 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 PRLP01236 227 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 DNTTP04053 509 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 TPSB2P20231 275 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 HOXA6P31267 233 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 ADRA1AP35348 466 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 TNNT3P45378 269 aaPredicted RBP21.15■□□□□ 0.98
LSM6-207ENST00000515311 POLR2LP62875 67 aaKnown RBP21.15■□□□□ 0.98
LSM6-207ENST00000515311 MRPS25P82663 173 aaKnown RBP21.15■□□□□ 0.98
LSM6-207ENST00000515311 KCNJ11Q14654 390 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 TPSAB1Q15661 275 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 TTC31Q49AM3 519 aaPredicted RBP21.15■□□□□ 0.98
LSM6-207ENST00000515311 DUPD1Q68J44 220 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 PCGF5Q86SE9 256 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 RASSF3Q86WH2 238 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 LRRN4CLQ8ND94 238 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 PDCD6IPQ8WUM4 868 aaKnown RBP21.15■□□□□ 0.98
LSM6-207ENST00000515311 HMGB4Q8WW32 186 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 SNF8Q96H20 258 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 HHIPQ96QV1 700 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 SLC6A17Q9H1V8 727 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 DYRK4Q9NR20 520 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 PRMT8Q9NR22 394 aaPredicted RBP21.15■□□□□ 0.98
LSM6-207ENST00000515311 EBF1Q9UH73 591 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 PCDHB9Q9Y5E1 797 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 KMT2EQ8IZD2 1858 aa21.15■□□□□ 0.98
LSM6-207ENST00000515311 C16orf96A6NNT2 1141 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 DNALI1O14645 258 aaPredicted RBP21.14■□□□□ 0.97
LSM6-207ENST00000515311 NDST3O95803 873 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 CPP00450 1065 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 GRIA4P48058 902 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 LMAN1P49257 510 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 SUOXP51687 545 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 CCDC15Q0P6D6 951 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 NAPEPLDQ6IQ20 393 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 ANO7Q6IWH7 933 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 RANBP10Q6VN20 620 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 USP30Q70CQ3 517 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 PARS2Q7L3T8 475 aaKnown RBP21.14■□□□□ 0.97
LSM6-207ENST00000515311 LINC00523Q86TU6 105 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 PPIL6Q8IXY8 311 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 AADATQ8N5Z0 425 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 MDGA1Q8NFP4 955 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 CPT1BQ92523 772 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 FAM131CQ96AQ9 280 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 ARRDC3Q96B67 414 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 FICDQ9BVA6 458 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 BCCIPQ9P287 314 aaKnown RBP eCLIP21.14■□□□□ 0.97
LSM6-207ENST00000515311 TPX2Q9ULW0 747 aaKnown RBP21.14■□□□□ 0.97
LSM6-207ENST00000515311 CHKBQ9Y259 395 aa21.14■□□□□ 0.97
LSM6-207ENST00000515311 K7ESF4 209 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 SEC31AO94979 1220 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 HEXIM1O94992 359 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 PDHA1P08559 390 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 ACADMP11310 421 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 HLA-DPA1P20036 260 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 DRD3P35462 400 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 RPL21P46778 160 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 METAP1P53582 386 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 DRG2P55039 364 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 POM121L1PQ3SYA9 428 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 RNASEH2BQ5TBB1 312 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 KIAA1324Q6UXG2 1013 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 ERN2Q76MJ5 926 aaKnown RBP21.13■□□□□ 0.97
LSM6-207ENST00000515311 HOOK3Q86VS8 718 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 ZSWIM9Q86XI8 627 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 CACUL1Q86Y37 369 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 PAF1Q8N7H5 531 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 DTWD2Q8NBA8 298 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 BBOF1Q8ND07 529 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 PIH1D2Q8WWB5 315 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 SEC14L1Q92503 715 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 TBL1YQ9BQ87 522 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 ARNT2Q9HBZ2 717 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 C11orf16Q9NQ32 467 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 WHRNQ9P202 907 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 FZD4Q9ULV1 537 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 PHTF1Q9UMS5 762 aa21.13■□□□□ 0.97
LSM6-207ENST00000515311 UPK3BL1B0FP48 263 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 BHMG1C9JSJ3 638 aaPredicted RBP21.12■□□□□ 0.97
LSM6-207ENST00000515311 UPK3BL2E5RIL1 263 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 SMAPO00193 183 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 SLC7A4O43246 635 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 AGTP01019 485 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 IGLV3-19P01714 112 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 FGF1P05230 155 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 ATXN1LP0C7T5 689 aaKnown RBP21.12■□□□□ 0.97
LSM6-207ENST00000515311 P2RY2P41231 377 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 NEK3P51956 506 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 SLC7A5Q01650 507 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 CNTN1Q12860 1018 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 MORF4L2Q15014 288 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 SLC1A5Q15758 541 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 UGP2Q16851 508 aa21.12■□□□□ 0.97
LSM6-207ENST00000515311 SIRPB2Q5JXA9 342 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms