RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ACAP2Q15057 778 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 ALFQ53S48 1182 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 RAP1GAP2Q684P5 730 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 MFSD6LQ8IWD5 586 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 FBXW8Q8N3Y1 598 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 HEXDCQ8WVB3 486 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 NRG4Q8WWG1 115 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 PSMG2Q969U7 264 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 RPRD1AQ96P16 312 aaPredicted RBP14.97□□□□□ -0.01
NUP54-217ENST00000514987 ZNF184Q99676 751 aaPredicted RBP14.97□□□□□ -0.01
NUP54-217ENST00000514987 POLR1EQ9GZS1 481 aaKnown RBP14.97□□□□□ -0.01
NUP54-217ENST00000514987 ATXN3LQ9H3M9 355 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 S100A14Q9HCY8 104 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 SRRDQ9UH36 339 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 PCDHB7Q9Y5E2 793 aa14.97□□□□□ -0.01
NUP54-217ENST00000514987 SLC12A8A0AV02 714 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 CNTN5O94779 1100 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 FGF1P05230 155 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 HAPLN1P10915 354 aaPredicted RBP14.96□□□□□ -0.01
NUP54-217ENST00000514987 SELPP16109 830 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 PIK3R1P27986 724 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 PRAMEP78395 509 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 GALNT1Q10472 559 aaPredicted RBP14.96□□□□□ -0.01
NUP54-217ENST00000514987 TBL3Q12788 808 aaKnown RBP14.96□□□□□ -0.01
NUP54-217ENST00000514987 DLG1Q12959 904 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 TAF10Q12962 218 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 LBRQ14739 615 aaKnown RBP14.96□□□□□ -0.01
NUP54-217ENST00000514987 LSM12Q3MHD2 195 aaKnown RBP14.96□□□□□ -0.01
NUP54-217ENST00000514987 TECRLQ5HYJ1 363 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 SIRPB2Q5JXA9 342 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 FAM45BPQ6NSW5 357 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 CNSTQ6PJW8 725 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 FRMD7Q6ZUT3 714 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 KDELC2Q7Z4H8 507 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 CILP2Q8IUL8 1156 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 DEFB107AQ8IZN7 70 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 LSMEM2Q8N112 164 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 CCNYL1Q8N7R7 359 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 FAM45AQ8TCE6 357 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 IFT43Q96FT9 208 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 TRMOQ9BU70 441 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 ZNF385DQ9H6B1 395 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 MAN1C1Q9NR34 630 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 IGSF5Q9NSI5 407 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 RNF186Q9NXI6 227 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 ZDHHC2Q9UIJ5 367 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 VPS28Q9UK41 221 aa14.96□□□□□ -0.01
NUP54-217ENST00000514987 LOC100653049A0A140TA62 436 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 MTMR11A4FU01 709 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 PRAMEF11O60813 436 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 KRT34O76011 436 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 ZDHHC11BP0C7U3 371 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 MTTPP55157 894 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 XIAPP98170 497 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 DSC2Q02487 901 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 ACVR1Q04771 509 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 CYLC2Q14093 348 aaPredicted RBP14.95□□□□□ -0.02
NUP54-217ENST00000514987 GSTA3Q16772 222 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 C5orf22Q49AR2 442 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 RALGPS1Q5JS13 557 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 HECTD2Q5U5R9 776 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 ANKS3Q6ZW76 656 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 LRRC8DQ7L1W4 858 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 MIB1Q86YT6 1006 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 KDM1BQ8NB78 822 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 KYQ8NBH2 561 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 OR13J1Q8NGT2 312 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 GPR150Q8NGU9 434 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 ARRDC2Q8TBH0 407 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 IGSF8Q969P0 613 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 MIEF2Q96C03 454 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 MAELQ96JY0 434 aaKnown RBP14.95□□□□□ -0.02
NUP54-217ENST00000514987 UBXN10Q96LJ8 280 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 LENG8Q96PV6 779 aaPredicted RBP14.95□□□□□ -0.02
NUP54-217ENST00000514987 TMEM175Q9BSA9 504 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 POMKQ9H5K3 350 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
NUP54-217ENST00000514987 VWA7Q9Y334 891 aa14.95□□□□□ -0.02
NUP54-217ENST00000514987 IPO13O94829 963 aaKnown RBP14.94□□□□□ -0.02
NUP54-217ENST00000514987 OR1E1P30953 314 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 EPHB1P54762 984 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 NSUN2Q08J23 767 aaKnown RBP eCLIP14.94□□□□□ -0.02
NUP54-217ENST00000514987 BFSP2Q13515 415 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ZNF235Q14590 738 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 MGAT5BQ3V5L5 792 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ANO7Q6IWH7 933 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 MRNIPQ6NTE8 343 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 TRIM67Q6ZTA4 783 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 TXNDC5Q8NBS9 432 aaKnown RBP14.94□□□□□ -0.02
NUP54-217ENST00000514987 OR6P1Q8NGX9 317 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 CEP70Q8NHQ1 597 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 AGR3Q8TD06 166 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 PXYLP1Q8TE99 480 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 KLHL5Q96PQ7 755 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 ZIC5Q96T25 663 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 OSBPL1AQ9BXW6 950 aa14.94□□□□□ -0.02
NUP54-217ENST00000514987 MRPL9Q9BYD2 267 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms