RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 MROH2AA6NES4 1674 aa12.56□□□□□ -0.4
COL11A1-210ENST00000512756 SLC9A3R1O14745 358 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 FLT3P36888 993 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 GSTM5P46439 218 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 DGCR6Q14129 220 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 PPM1LQ5SGD2 360 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 BPIFB6Q8NFQ5 453 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ELMO1Q92556 727 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 NKD2Q969F2 451 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 MYLPFQ96A32 169 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 P2RY11Q96G91 374 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 NDNQ99608 321 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 KLHL1Q9NR64 748 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 VWA7Q9Y334 891 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ADCY6O43306 1168 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CDK18Q07002 472 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 LACTB2Q53H82 288 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 KIAA0408Q6ZU52 694 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 TRAPPC5Q8IUR0 188 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 KBTBD8Q8NFY9 601 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ZNF483Q8TF39 744 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 COPS5Q92905 334 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 HOPXQ9BPY8 73 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 PLGRKTQ9HBL7 147 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 SPATA2Q9UM82 520 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ANGPT4Q9Y264 503 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 PLLPQ9Y342 182 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 MFN2O95140 757 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ALYREFQ86V81 257 aaKnown RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 OFCC1Q8IZS5 231 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 HELQQ8TDG4 1101 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CLN6Q9NWW5 311 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ZNF232Q9UNY5 417 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 SLC15A5A6NIM6 579 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 H0YC42 278 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CSH1P0DML2 217 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CSH2P0DML3 217 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CRYBB1P53674 252 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 USP46P62068 366 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 BHLHB9Q6PI77 547 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 USP50Q70EL3 339 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 NELL1Q92832 810 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 FAIM2Q9BWQ8 316 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 POLR1BQ9H9Y6 1135 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CCNB1IP1Q9NPC3 277 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 SNHG28P0DPA3 235 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ROR2Q01974 943 aaKnown RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 FOLH1Q04609 750 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ITGADQ13349 1161 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 PPP1R26Q5T8A7 1209 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 LCLAT1Q6UWP7 414 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 GCNT7Q6ZNI0 430 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 GPR180Q86V85 440 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 JOSD2Q8TAC2 188 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 CCDC28BQ9BUN5 200 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ST6GALNAC4Q9H4F1 302 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 FAM124BQ9H5Z6 455 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 ERVK-5Q9HDB9 667 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 GIT1Q9Y2X7 761 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 HES2Q9Y543 173 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
COL11A1-210ENST00000512756 YDJCA8MPS7 323 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 WNT7AO00755 349 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 FTH1P02794 183 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 WARSP23381 471 aaKnown RBP12.54□□□□□ -0.4
COL11A1-210ENST00000512756 SPIDRQ14159 915 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 CLK4Q9HAZ1 481 aaKnown RBP12.54□□□□□ -0.4
COL11A1-210ENST00000512756 SLC17A7Q9P2U7 560 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 PPIBP23284 216 aaKnown RBP12.54□□□□□ -0.4
COL11A1-210ENST00000512756 RPL38P63173 70 aaKnown RBP12.54□□□□□ -0.4
COL11A1-210ENST00000512756 CTBP1Q13363 440 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 UGCGQ16739 394 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 KLHL17Q6TDP4 642 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 IKBIPQ70UQ0 350 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 DEFB132Q7Z7B7 95 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 OR4L1Q8NH43 312 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
COL11A1-210ENST00000512756 MAF1Q9H063 256 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-210ENST00000512756 AP4B1Q9Y6B7 739 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 SNPHO15079 494 aa12.54□□□□□ -0.4
COL11A1-210ENST00000512756 BUD23O43709 281 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms