RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 TM7SF3Q9NS93 570 aa16.06■□□□□ 0.16
DDX41-214ENST00000512334 DTLQ9NZJ0 730 aa16.06■□□□□ 0.16
DDX41-214ENST00000512334 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.06■□□□□ 0.16
DDX41-214ENST00000512334 TTLL3Q9Y4R7 772 aa16.06■□□□□ 0.16
DDX41-214ENST00000512334 ASCC3Q8N3C0 2202 aaKnown RBP16.06■□□□□ 0.16
DDX41-214ENST00000512334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.05■□□□□ 0.16
DDX41-214ENST00000512334 TSPAN11A1L157 253 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 H0Y8X5 98 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 MATN3O15232 486 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 SPINT1O43278 529 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 MAGEC1O60732 1142 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 MMP20O60882 483 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 KCNK5O95279 499 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 PRKCGP05129 697 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 CD59P13987 128 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 CCNCP24863 283 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 CCT8P50990 548 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 CLDN2P57739 230 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 IL9RQ01113 521 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 SLC10A2Q12908 348 aaPredicted RBP16.05■□□□□ 0.16
DDX41-214ENST00000512334 SLC14A1Q13336 389 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 HNRNPDQ14103 355 aaKnown RBP16.05■□□□□ 0.16
DDX41-214ENST00000512334 FGL2Q14314 439 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 PRAMEF14Q5SWL7 426 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 SLC9A4Q6AI14 798 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 ERAP2Q6P179 960 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 CCDC50Q8IVM0 306 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.05■□□□□ 0.16
DDX41-214ENST00000512334 TMEM145Q8NBT3 493 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 PDCD6IPQ8WUM4 868 aaKnown RBP16.05■□□□□ 0.16
DDX41-214ENST00000512334 KLHDC7BQ96G42 594 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 WRAP53Q9BUR4 548 aaKnown RBP16.05■□□□□ 0.16
DDX41-214ENST00000512334 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 PCDH12Q9NPG4 1184 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 HAUS2Q9NVX0 235 aa16.05■□□□□ 0.16
DDX41-214ENST00000512334 DNAH14Q0VDD8 3507 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 GIPC1O14908 333 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 TM7SF2O76062 418 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 ZNF883P0CG24 379 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 THEGLP0DJG4 465 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 KRT10P13645 584 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 CCNB1P14635 433 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 CSRP1P21291 193 aaKnown RBP16.04■□□□□ 0.16
DDX41-214ENST00000512334 CDKN2BP42772 138 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 MARCKSL1P49006 195 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 SUOXP51687 545 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 NXPH1P58417 271 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 POLR2LP62875 67 aaKnown RBP16.04■□□□□ 0.16
DDX41-214ENST00000512334 FAM193AP78312 1265 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 OVGP1Q12889 678 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 IQCHQ86VS3 1027 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 ZSWIM9Q86XI8 627 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 CCDC13Q8IYE1 715 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 TEX26Q8N6G2 289 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
DDX41-214ENST00000512334 KRT35Q92764 455 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 HDAC11Q96DB2 347 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 TSGA13Q96PP4 275 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 LGMNQ99538 433 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 ELF4Q99607 663 aaPredicted RBP16.04■□□□□ 0.16
DDX41-214ENST00000512334 C1QTNF2Q9BXJ5 285 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 POLR1EQ9GZS1 481 aaKnown RBP16.04■□□□□ 0.16
DDX41-214ENST00000512334 RBM22Q9NW64 420 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX41-214ENST00000512334 ATP8A1Q9Y2Q0 1164 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 PCDHGC4Q9Y5F7 938 aa16.04■□□□□ 0.16
DDX41-214ENST00000512334 TRAFD1O14545 582 aaPredicted RBP16.03■□□□□ 0.16
DDX41-214ENST00000512334 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
DDX41-214ENST00000512334 RAD51BO15315 384 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 PJA2O43164 708 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 SH3BP5O60239 455 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 DFNA5O60443 496 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 ZRANB2O95218 330 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX41-214ENST00000512334 CR2P20023 1033 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 SEMG2Q02383 582 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 PPIDQ08752 370 aaKnown RBP16.03■□□□□ 0.16
DDX41-214ENST00000512334 AP1B1Q10567 949 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 TFDP2Q14188 446 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 SUZ12Q15022 739 aaKnown RBP16.03■□□□□ 0.16
DDX41-214ENST00000512334 PDK1Q15118 436 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 ZNF423Q2M1K9 1284 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 TMEM52BQ4KMG9 183 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 TFDP3Q5H9I0 405 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 RALGPS1Q5JS13 557 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 SPOCD1Q6ZMY3 1216 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 GCNT7Q6ZNI0 430 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
DDX41-214ENST00000512334 NAXDQ8IW45 347 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 KATNAL2Q8IYT4 538 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 RCOR2Q8IZ40 523 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 MAML1Q92585 1016 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 ECHDC3Q96DC8 303 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 RBM41Q96IZ5 413 aaKnown RBP16.03■□□□□ 0.16
DDX41-214ENST00000512334 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
DDX41-214ENST00000512334 CAMK1GQ96NX5 476 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms