RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 CWC15Q9P013 229 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 MTRF1LQ9UGC7 380 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 NFU1Q9UMS0 254 aa10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 SHOC2Q9UQ13 582 aa10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 HBS1LQ9Y450 684 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 STON1Q9Y6Q2 735 aa10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 PLXNA2O75051 1894 aa10.68□□□□□ -0.7
PDLIM5-217ENST00000512274 FGF10O15520 208 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 GP1BBP13224 206 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 KCNJ1P48048 391 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 VAC14Q08AM6 782 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 TAF10Q12962 218 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 CALCOCO2Q13137 446 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 SLMAPQ14BN4 828 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 MORF4L2Q15014 288 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 PPP1R7Q15435 360 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 TRIP4Q15650 581 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 P3H1Q32P28 736 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 KAZNQ674X7 775 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 NCBP2-AS2Q69YL0 99 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 RFX8Q6ZV50 586 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 PCGF5Q86SE9 256 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 METTL3Q86U44 580 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 RFX6Q8HWS3 928 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 CDKL3Q8IVW4 592 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 LZTR1Q8N653 840 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 KIAA1958Q8N8K9 716 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 KCNE4Q8WWG9 221 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 ATG4AQ8WYN0 398 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 PRCCQ92733 491 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 FATE1Q969F0 183 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 FBXO32Q969P5 355 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 OTUB2Q96DC9 234 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 XPO6Q96QU8 1125 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 EPAS1Q99814 870 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 TRIM51Q9BSJ1 452 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 FRMD8Q9BZ67 464 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 NMUR1Q9HB89 426 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 ZNF148Q9UQR1 794 aa10.67□□□□□ -0.7
PDLIM5-217ENST00000512274 IGLV3-10A0A075B6K4 115 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 A0A1W2PQH9 124 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 ESYT3A0FGR9 886 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 I6L893 689 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 GFRA2O00451 464 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 TERTO14746 1132 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 MTSS1O43312 755 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 COCHO43405 550 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 SASH3O75995 380 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 FSBPO95073 299 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 LATS1O95835 1130 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 KRT14P02533 472 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 MPOP05164 745 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 C1SP09871 688 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 RBP3P10745 1247 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 TYRP14679 529 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 PECAM1P16284 738 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 SERPINB6P35237 376 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 CTSKP43235 329 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 GRIA4P48058 902 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 EIF3EP60228 445 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 MMRN1Q13201 1228 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 C5orf22Q49AR2 442 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 SLC45A4Q5BKX6 768 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 ARTNQ5T4W7 220 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 HIBCHQ6NVY1 386 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 LRIG3Q6UXM1 1119 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 ZNF574Q6ZN55 896 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 TMC3Q7Z5M5 1100 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 IQCKQ8N0W5 287 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 FBXO25Q8TCJ0 367 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 QKIQ96PU8 341 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 BBS2Q9BXC9 721 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 MED4Q9NPJ6 270 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 KCNK4Q9NYG8 393 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 PLK2Q9NYY3 685 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 DTLQ9NZJ0 730 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 PPARGC1AQ9UBK2 798 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 HPCAL4Q9UM19 191 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 NEU3Q9UQ49 428 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 CLCA2Q9UQC9 943 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 MGAQ8IWI9 3026 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 CFAP46Q8IYW2 2715 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 ATMQ13315 3056 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 KNL1Q8NG31 2342 aa10.66□□□□□ -0.7
PDLIM5-217ENST00000512274 A0A1B0GTQ1 180 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 C5orf60A6NFR6 353 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 EEF2KO00418 725 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 DNALI1O14645 258 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 GCATO75600 419 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 NUDT17P0C025 328 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 CDK4P11802 303 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 RARGP13631 454 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 GOT1P17174 413 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 MX2P20592 715 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 ACSL1P33121 698 aa10.65□□□□□ -0.7
PDLIM5-217ENST00000512274 DGKGP49619 791 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms