RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SFMBT2Q5VUG0 894 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC26A9Q7LBE3 791 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NLRP9Q7RTR0 991 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TEX29Q8N6K0 151 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCNYQ8ND76 341 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ASB5Q8WWX0 329 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MR1Q95460 341 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CYP2S1Q96SQ9 504 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MRPL45Q9BRJ2 306 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CRACR2AQ9BSW2 395 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RPP25Q9BUL9 199 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC25A23Q9BV35 468 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FSD1LQ9BXM9 530 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FAM129AQ9BZQ8 928 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 POLR1EQ9GZS1 481 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DNAJC25Q9H1X3 360 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 BLZF1Q9H2G9 400 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SUV39H2Q9H5I1 410 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCSER2Q9H7U1 834 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PRSS16Q9NQE7 514 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 AGO1Q9UL18 857 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC39A10Q9ULF5 831 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MRPS33Q9Y291 106 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RAXQ9Y2V3 346 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TECTAO75443 2155 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 A0A087WV48 116 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C2orf78A6NCI8 922 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MEIS3P2A8K0S8 358 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 B4DGG1 531 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PSMD12O00232 456 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CASKO14936 926 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PHF2O75151 1096 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LRRN2O75325 713 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SOAT2O75908 522 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PIAS2O75928 621 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 S100BP04271 92 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PLEKP08567 350 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ATF6P18850 670 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CAPN3P20807 821 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CDH3P22223 829 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 UGT1A1P22309 533 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TEAD1P28347 426 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCKBRP32239 447 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 VIPR1P32241 457 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CD86P42081 329 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 UBE2HP62256 183 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ACTN3Q08043 901 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ABHD18Q0P651 414 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCDC6Q16204 474 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RBBP7Q16576 425 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MYLK3Q32MK0 819 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ZC3H12AQ5D1E8 599 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PIK3R6Q5UE93 754 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PEAR1Q5VY43 1037 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RESP18Q5W5W9 173 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF765Q7L2R6 523 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PIP4P1Q86T03 277 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PPP1R3BQ86XI6 285 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCAR2Q8N163 923 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 UBL4BQ8N7F7 174 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TMEM102Q8N9M5 508 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 EDEM1Q92611 657 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 UCN3Q969E3 161 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TRIM44Q96DX7 344 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CLIP3Q96DZ5 547 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NUS1Q96E22 293 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 HMCESQ96FZ2 354 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LENG8Q96PV6 779 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NAP1L3Q99457 506 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NDC1Q9BTX1 674 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DDA1Q9BW61 102 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC39A8Q9C0K1 460 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TMEM245Q9H330 911 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CARS2Q9HA77 564 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CSNK1G1Q9HCP0 422 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ATP13A2Q9NQ11 1180 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FAM114A2Q9NRY5 505 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DNAJC11Q9NVH1 559 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 APEX2Q9UBZ4 518 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 IL17BQ9UHF5 180 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RWDD2AQ9UIY3 292 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CRLS1Q9UJA2 301 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ACSL5Q9ULC5 683 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CRYL1Q9Y2S2 319 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RAI2Q9Y5P3 530 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SNX11Q9Y5W9 270 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 URB1O60287 2271 aaKnown RBP2.86□□□□□ -1.95
CLOCK-209ENST00000511124 CAPN14A8MX76 684 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 ACOT7O00154 380 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 TAF4O00268 1085 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 CCP110O43303 1012 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 SPOPO43791 374 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 CREB3O43889 395 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 H2AFYO75367 372 aaKnown RBP2.86□□□□□ -1.95
CLOCK-209ENST00000511124 DXOO77932 396 aaKnown RBP2.86□□□□□ -1.95
CLOCK-209ENST00000511124 FTH1P02794 183 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 RPLP0P05388 317 aaKnown RBP2.86□□□□□ -1.95
CLOCK-209ENST00000511124 HOXC4P09017 264 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-209ENST00000511124 GP1BBP13224 206 aa2.86□□□□□ -1.95
CLOCK-209ENST00000511124 NME1P15531 152 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms