RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 SLC7A4O43246 635 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LDB2O43679 373 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CCDC22O60826 627 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CLDN11O75508 207 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 STC2O76061 302 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 GJB5O95377 273 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 WISP3O95389 354 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 OLFM2O95897 454 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 EPOP01588 193 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 AHSGP02765 367 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 KLKB1P03952 638 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 URODP06132 367 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SERPINA6P08185 405 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SBK3P0C264 359 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 MYL4P12829 197 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 STMN1P16949 149 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LAG3P18627 525 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CALB2P22676 271 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PSMA3P25788 255 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 OR1E1P30953 314 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CORO1AP31146 461 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC8A1P32418 973 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ETFBP38117 255 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LEPRP48357 1165 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PPP3CCP48454 512 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 NUMBP49757 651 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 RASSF2P50749 326 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ARSDP51689 593 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 KPNA2P52292 529 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF140P52738 457 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PRKAA2P54646 552 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 RAB10P61026 200 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 RPS24P62847 133 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 POU4F1Q01851 419 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 GNA12Q03113 381 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 NSUN2Q08J23 767 aaKnown RBP eCLIP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PLD1Q13393 1074 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LAMB3Q13751 1172 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 THOC5Q13769 683 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ITGA9Q13797 1035 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 RAB33AQ14088 237 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 IKBKEQ14164 716 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 USP10Q14694 798 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 RFTN1Q14699 578 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 VEPH1Q14D04 833 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TSNAXIP1Q2TAA8 658 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SIRPB2Q5JXA9 342 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LIPMQ5VYY2 423 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 KIAA1841Q6NSI8 718 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LRRC8EQ6NSJ5 796 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 RFWD3Q6PCD5 774 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 NAPRTQ6XQN6 538 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ATG14Q6ZNE5 492 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SETD3Q86TU7 594 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF354CQ86Y25 554 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TREML1Q86YW5 311 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CILP2Q8IUL8 1156 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC41A1Q8IVJ1 513 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CEP97Q8IW35 865 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 WDR75Q8IWA0 830 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 LMNTD2Q8IXW0 634 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 GPR65Q8IYL9 337 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CMTR2Q8IYT2 770 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TNS4Q8IZW8 715 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TMEM151AQ8N4L1 468 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC25A41Q8N5S1 370 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 FAM13CQ8NE31 585 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 OR7D4Q8NG98 312 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 OR52K2Q8NGK3 314 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF461Q8TAF7 563 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 GABPB2Q8TAK5 448 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PIWIL2Q8TC59 973 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PPP4R1Q8TF05 950 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 KCTD4Q8WVF5 259 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SREK1Q8WXA9 508 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF689Q96CS4 500 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 NSL1Q96IY1 281 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ELMO2Q96JJ3 720 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TSNARE1Q96NA8 513 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF558Q96NG5 402 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 GPR78Q96P69 363 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 PSKH2Q96QS6 385 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 SEMA3CQ99985 751 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 EBF4Q9BQW3 602 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CCDC106Q9BWC9 280 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 GATA5Q9BWX5 397 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TBC1D10AQ9BXI6 508 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 KLF16Q9BXK1 252 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 NACA2Q9H009 215 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 CDH19Q9H159 772 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 MMADHCQ9H3L0 296 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TASP1Q9H6P5 420 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 IGSF5Q9NSI5 407 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 WDR70Q9NW82 654 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 OXSMQ9NWU1 459 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 TRPM5Q9NZQ8 1165 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 ARMCX1Q9P291 453 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 XPR1Q9UBH6 696 aa4.8□□□□□ -1.64
PDLIM5-214ENST00000510099 UXTQ9UBK9 157 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms