RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 LRRC38Q5VT99 294 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 KAZNQ674X7 775 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 ADAT2Q7Z6V5 191 aaKnown RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 SLC22A18ASQ8N1D0 253 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 TEX26Q8N6G2 289 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 LRRC57Q8N9N7 239 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 OR13H1Q8NG92 308 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 MAML1Q92585 1016 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 ECHDC3Q96DC8 303 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 ZNF599Q96NL3 588 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 MGME1Q9BQP7 344 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 C1QTNF2Q9BXJ5 285 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 OSBPL1AQ9BXW6 950 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 SLC17A9Q9BYT1 436 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 C10orf88Q9H8K7 445 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 DKK3Q9UBP4 350 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 PACSIN2Q9UNF0 486 aaPredicted RBP13.69□□□□□ -0.22
SNF8-206ENST00000509989 SPEGQ15772 3267 aa13.69□□□□□ -0.22
SNF8-206ENST00000509989 UPK3BL1B0FP48 263 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 UPK3BL2E5RIL1 263 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 TLR4O00206 839 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 PDHA1P08559 390 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 IGFALSP35858 605 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 NOVA1P51513 510 aaKnown RBP13.68□□□□□ -0.22
SNF8-206ENST00000509989 RAD51Q06609 339 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 NSUN2Q08J23 767 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNF8-206ENST00000509989 RFTN1Q14699 578 aaPredicted RBP13.68□□□□□ -0.22
SNF8-206ENST00000509989 UGP2Q16851 508 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 SETMARQ53H47 684 aaPredicted RBP13.68□□□□□ -0.22
SNF8-206ENST00000509989 ZNF542PQ5EBM4 170 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 C11orf63Q6NUN7 778 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 NEK5Q6P3R8 708 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 DAAM2Q86T65 1068 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 MAP7D3Q8IWC1 876 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 PELI3Q8N2H9 469 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 ALG3Q92685 438 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 HAUS1Q96CS2 278 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 OLFM3Q96PB7 478 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 TSGA13Q96PP4 275 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 NUDCD1Q96RS6 583 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 TM7SF3Q9NS93 570 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
SNF8-206ENST00000509989 PTPRBP23467 1997 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 hCG_1818297A0A087WSY0 165 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 MACROD2A1Z1Q3 448 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 PRAMEF26H0Y7S4 382 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 NEMP1O14524 444 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 RIOK3O14730 519 aaKnown RBP13.67□□□□□ -0.22
SNF8-206ENST00000509989 APOL1O14791 398 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 MATN3O15232 486 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 PSTPIP1O43586 416 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 JCHAINP01591 159 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 MMP2P08253 660 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 HNRNPA2B1P22626 353 aaKnown RBP13.67□□□□□ -0.22
SNF8-206ENST00000509989 CCNCP24863 283 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 C21orf59P57076 290 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 RPS21P63220 83 aaKnown RBP13.67□□□□□ -0.22
SNF8-206ENST00000509989 BCL2L1Q07817 233 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 TEAD4Q15561 434 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 IFI16Q16666 785 aaKnown RBP13.67□□□□□ -0.22
SNF8-206ENST00000509989 TMEM52BQ4KMG9 183 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 KCTD16Q68DU8 428 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 KIAA1161Q6NSJ0 714 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 RFLNAQ6ZTI6 216 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 KIAA1328Q86T90 577 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 MFSD2AQ8NA29 543 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
SNF8-206ENST00000509989 FEM1CQ96JP0 617 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 TUBGCP5Q96RT8 1024 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 FAM118BQ9BPY3 351 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 SCUBE2Q9NQ36 999 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 RBM22Q9NW64 420 aaKnown RBP eCLIP13.67□□□□□ -0.22
SNF8-206ENST00000509989 DMTF1Q9Y222 760 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 CAPN6Q9Y6Q1 641 aa13.67□□□□□ -0.22
SNF8-206ENST00000509989 A0A1B0GTQ1 180 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 BTNL10A8MVZ5 291 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
SNF8-206ENST00000509989 TSPAN6O43657 245 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CST8O60676 142 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 SDC3O75056 442 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 FTCDO95954 541 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 ALPIP09923 528 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 THEGLP0DJG4 465 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CCNB1P14635 433 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 CTPS1P17812 591 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 SDHBP21912 280 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 SERPINA4P29622 427 aa13.66□□□□□ -0.22
SNF8-206ENST00000509989 MMP12P39900 470 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms