RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 MACC1Q6ZN28 852 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SDR16C5Q8N3Y7 309 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SCG3Q8WXD2 468 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF578Q96N58 590 aaPredicted RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SYT11Q9BT88 431 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 WRAP53Q9BUR4 548 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SLC39A8Q9C0K1 460 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 HAUS4Q9H6D7 363 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 MRPL47Q9HD33 250 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 TAS2R14Q9NYV8 317 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 LHX3Q9UBR4 397 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 APOBEC3BQ9UH17 382 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 PCSK1NQ9UHG2 260 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SHROOM3Q8TF72 1996 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 LY6G6EA0A0G2JKS1 128 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 TSPAN11A1L157 253 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 EME2A4GXA9 379 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 CFAP69A5D8W1 941 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LRRC53A6NM62 1247 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 EIF4E1BA6NMX2 242 aaKnown RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LMO7DNF2Z398 122 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 J3KR12 359 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 TLX3O43711 291 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 USP12O75317 370 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 CSO75390 466 aaKnown RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 ANXA6P08133 673 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 MYF5P13349 255 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 ITIH2P19823 946 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 HTR1BP28222 390 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 SERPINA4P29622 427 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 IGFALSP35858 605 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LSSP48449 732 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 RFTN1Q14699 578 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 ACAP1Q15027 740 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 AGERQ15109 404 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 CDKN3Q16667 212 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LRRK1Q38SD2 2015 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 TBC1D25Q3MII6 688 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 PRRT3Q5FWE3 981 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LRRC73Q5JTD7 316 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 ESRP1Q6NXG1 681 aaKnown RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 EFL1Q7Z2Z2 1120 aaKnown RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 SRLQ86TD4 932 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 PHACTR4Q8IZ21 702 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 FSTL5Q8N475 847 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 LZTR1Q8N653 840 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 TP53I13Q8NBR0 393 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 NETO2Q8NC67 525 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 WDR48Q8TAF3 677 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 TRIM11Q96F44 468 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 EXOC2Q96KP1 924 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 BOCQ9BWV1 1114 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 ATP13A3Q9H7F0 1226 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 PDFQ9HBH1 243 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
KDM3B-206ENST00000509468 U3KQA8 63 aa12.75□□□□□ -0.37
KDM3B-206ENST00000509468 APC2O95996 2303 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 YY2O15391 372 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 BUB1BO60566 1050 aaPredicted RBP12.74□□□□□ -0.37
KDM3B-206ENST00000509468 GCATO75600 419 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 PIGNO95427 931 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ALPIP09923 528 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 MYBL1P10243 752 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 CTSEP14091 401 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ITPKBP27987 946 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 PRKCIP41743 596 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF165P49910 485 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 LIG3P49916 1009 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 RENBPP51606 427 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ERVPABLB-1P60509 514 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 IL10RBQ08334 325 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 KLHL30Q0D2K2 578 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ELOCQ15369 112 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 WSCD2Q2TBF2 565 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 PPP6R3Q5H9R7 873 aaPredicted RBP12.74□□□□□ -0.37
KDM3B-206ENST00000509468 TPRG1LQ5T0D9 272 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ARFGAP1Q8N6T3 406 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF248Q8NDW4 579 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 NAT6Q93015 286 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 CELF6Q96J87 481 aaKnown RBP12.74□□□□□ -0.37
KDM3B-206ENST00000509468 APOOQ9BUR5 198 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 CAAP1Q9H8G2 361 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 SP110Q9HB58 689 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 PCDH12Q9NPG4 1184 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 GPATCH2LQ9NWQ4 482 aa12.74□□□□□ -0.37
KDM3B-206ENST00000509468 CNOT8Q9UFF9 292 aaKnown RBP12.74□□□□□ -0.37
KDM3B-206ENST00000509468 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms