RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MORF4L2Q15014 288 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 EPHA7Q15375 998 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CDONQ4KMG0 1287 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TTMPQ5BVD1 217 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 FBXO47Q5MNV8 452 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 IL23RQ5VWK5 629 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SPECC1LQ69YQ0 1117 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PGBD2Q6P3X8 592 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 NOTUMQ6P988 496 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TTC23LQ6PF05 361 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SARM1Q6SZW1 724 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 C6orf15Q6UXA7 325 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 DPP8Q6V1X1 898 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TRIM72Q6ZMU5 477 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 LARP4Q71RC2 724 aaKnown RBP eCLIP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 RABEPKQ7Z6M1 372 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 FJX1Q86VR8 437 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF677Q86XU0 584 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 RHPN2Q8IUC4 686 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC105Q8IYK2 499 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SLC43A2Q8N370 569 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 LIX1Q8N485 282 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TCP11L2Q8N4U5 519 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CCNYL1Q8N7R7 359 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 OR52M1Q8NGK5 317 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF384Q8TF68 577 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 DEPDC1BQ8WUY9 529 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 IFT81Q8WYA0 676 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 EXT2Q93063 718 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TMEM41AQ96HV5 264 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 METTL2AQ96IZ6 378 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 FAM71F1Q96KD3 344 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 FGD4Q96M96 766 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CFAP57Q96MR6 1250 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CDRT15Q96T59 188 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 RAD9AQ99638 391 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ACO2Q99798 780 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 JPH2Q9BR39 696 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GPR87Q9BY21 358 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 MRPL4Q9BYD3 311 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SHCBP1LQ9BZQ2 653 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 WNT8AQ9H1J5 351 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ABCG8Q9H221 673 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TPK1Q9H3S4 243 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 EPB41L1Q9H4G0 881 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 C17orf75Q9HAS0 396 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 MRPL40Q9NQ50 206 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 RRP7BPQ9NSQ0 103 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TMEM184CQ9NVA4 438 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 DNAJB9Q9UBS3 223 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ITGA11Q9UKX5 1188 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CORO1CQ9ULV4 474 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PADI4Q9UM07 663 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PCDHGB2Q9Y5G2 931 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PCDHGA9Q9Y5G4 932 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 MYBBP1AQ9BQG0 1328 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 C9orf84Q5VXU9 1444 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ANKRD50Q9ULJ7 1429 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GPATCH8Q9UKJ3 1502 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SYNMO15061 1565 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SHROOM2Q13796 1616 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 A0A0A6YYJ9 748 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SERTM2A0A1B0GWG4 89 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SLCO1B7G3V0H7 640 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TAF4O00268 1085 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 HNRNPRO43390 633 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ECE2O60344 883 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ULK1O75385 1050 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 RBMXL2O75526 392 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SPAG6O75602 509 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SURF6O75683 361 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 IPO13O94829 963 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 TMEM63AO94886 807 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SCAF4O95104 1147 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PRAMEF12O95522 483 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 OTCP00480 354 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 GJB1P08034 283 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 HMOX1P09601 288 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC192P0DO97 292 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PYGMP11217 842 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 CYP19A1P11511 503 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PEX2P28328 305 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PIK3CBP42338 1070 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 ATP12AP54707 1039 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 GPX6P59796 221 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SULT2A1Q06520 285 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 IL24Q13007 206 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 KLF1Q13351 362 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 XRCC4Q13426 336 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 GPM6BQ13491 265 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 RCN2Q14257 317 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 LPIN1Q14693 890 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 STARD3Q14849 445 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 RRS1Q15050 365 aaKnown RBP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 KRT31Q15323 416 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SF3B4Q15427 424 aaKnown RBP eCLIP4.6□□□□□ -1.67
NIPBL-206ENST00000509429 STILQ15468 1287 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 PARP6Q2NL67 630 aa4.6□□□□□ -1.67
NIPBL-206ENST00000509429 SMU1Q2TAY7 513 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms