RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 VSX1Q9NZR4 365 aaPredicted RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ABI3Q9P2A4 366 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 AGTPBP1Q9UPW5 1226 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 PKP3Q9Y446 797 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 CHST2Q9Y4C5 530 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 NOX1Q9Y5S8 564 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 WNK3Q9BYP7 1800 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 RALGAPBQ86X10 1494 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 PLCH1Q4KWH8 1693 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ZNF541Q9H0D2 1346 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 KIF1BO60333 1816 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 A1L4Q6 167 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 OR6C68A6NDL8 312 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 MARCH11A6NNE9 402 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 GRXCR1A8MXD5 290 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 MCIDASD6RGH6 385 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 M0QYT0 321 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SPRY2O43597 315 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 MT-ND3P03897 115 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SRPRAP08240 638 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 GSTM2P28161 218 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SLC8A1P32418 973 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 KIF5BP33176 963 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ANP32AP39687 249 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 JAK3P52333 1124 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 BLOC1S1P78537 153 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 RRP1BQ14684 758 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 NCAPH2Q6IBW4 605 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SLC2A7Q6PXP3 512 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SYNE3Q6ZMZ3 975 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ARHGEF18Q6ZSZ5 1173 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 GSPT2Q8IYD1 628 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 DPP10Q8N608 796 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 C12orf76Q8N812 135 aaPredicted RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 C11orf44Q8N8P7 122 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 IL17RCQ8NAC3 791 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SPC24Q8NBT2 197 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 GRK7Q8WTQ7 553 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 PSPC1Q8WXF1 523 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 HSPH1Q92598 858 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 P2RY11Q96G91 374 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 WDYHV1Q96HA8 205 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 TMEM176AQ96HP8 235 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 WWC2-AS2Q96NR7 200 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 CAMK1GQ96NX5 476 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ATP6V0BQ99437 205 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 CADM1Q9BY67 442 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 XPO4Q9C0E2 1151 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 CTDSP1Q9GZU7 261 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 TASP1Q9H6P5 420 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 MRPL44Q9H9J2 332 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SCPEP1Q9HB40 452 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 C20orf141Q9NUB4 165 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 COPG2Q9UBF2 871 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 HSPB7Q9UBY9 170 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 FBXL17Q9UF56 701 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 DDX25Q9UHL0 483 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 MOSPD1Q9UJG1 213 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SERTAD3Q9UJW9 196 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 INTS6Q9UL03 887 aaKnown RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 CDH7Q9ULB5 785 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 FZD4Q9ULV1 537 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ATP6V0A2Q9Y487 856 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 PCDHB2Q9Y5E7 798 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 TRPV2Q9Y5S1 764 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SIRT4Q9Y6E7 314 aaPredicted RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 CAPN7Q9Y6W3 813 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ABCA3Q99758 1704 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 AFF2P51816 1311 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 SYNRGQ9UMZ2 1314 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 BRD4O60885 1362 aaPredicted RBP2.33□□□□□ -2.04
PDE4D-218ENST00000509368 ATRNO75882 1429 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 KIAA1210Q9ULL0 1709 aa2.33□□□□□ -2.04
PDE4D-218ENST00000509368 IFIT3O14879 490 aaKnown RBP2.32□□□□□ -2.04
PDE4D-218ENST00000509368 ZBTB14O43829 449 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 AVILO75366 819 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 GALTP07902 379 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 FDPSP14324 419 aaKnown RBP2.32□□□□□ -2.04
PDE4D-218ENST00000509368 DESP17661 470 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 ERCC2P18074 760 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 SFPQP23246 707 aaKnown RBP eCLIP2.32□□□□□ -2.04
PDE4D-218ENST00000509368 PON1P27169 355 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 MCM5P33992 734 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 LIPAP38571 399 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 PBX3P40426 434 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 CASP3P42574 277 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 ARSEP51690 589 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 CXADRP78310 365 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 IDI1Q13907 227 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 PTPRRQ15256 657 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 MED22Q15528 200 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 ARMC4Q5T2S8 1044 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 SERTAD4-AS1Q5TG53 156 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 PMS2CLQ68D20 193 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 GRHL2Q6ISB3 625 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 CATSPER4Q7RTX7 472 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 P3H2Q8IVL5 708 aa2.32□□□□□ -2.04
PDE4D-218ENST00000509368 GUF1Q8N442 669 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms