RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PPARDQ03181 441 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 LRRC14Q15048 493 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 ELOCQ15369 112 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 UGP2Q16851 508 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 ESRP1Q6NXG1 681 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 VPS36Q86VN1 386 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 OR6C4Q8NGE1 309 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 IFI44Q8TCB0 444 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 LMX1AQ8TE12 382 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 IQCDQ96DY2 449 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 HSD3B7Q9H2F3 369 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 DHX35Q9H5Z1 703 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 BZW2Q9Y6E2 419 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 ATRXP46100 2492 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 TMEM191CA6NGB0 347 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 MMP20O60882 483 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 PALMO75781 387 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 DXOO77932 396 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 EIF4A3P38919 411 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 LSSP48449 732 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 IL10RBQ08334 325 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 KLHL30Q0D2K2 578 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 CYTH1Q15438 398 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 ANO6Q4KMQ2 910 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 ZNF542PQ5EBM4 170 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 FAXCQ5TGI0 409 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 KDM7AQ6ZMT4 941 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 LEKR1Q6ZMV7 388 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 BBS5Q8N3I7 341 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 ZNF599Q96NL3 588 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 UBL7Q96S82 380 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 SYT11Q9BT88 431 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 MAGEB5Q9BZ81 275 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 SP110Q9HB58 689 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 LHX3Q9UBR4 397 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 DOLKQ9UPQ8 538 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
CCHCR1-227ENST00000508852 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 LRRC53A6NM62 1247 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 TMX2-CTNND1H3BSU7 103 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 SPINT1O43278 529 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 BRINP1O60477 761 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 KELP23276 732 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 PCK1P35558 622 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 IGFALSP35858 605 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 MLLT3P42568 568 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 UCNP55089 124 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 PCBP4P57723 403 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 EIF2B5Q13144 721 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 MTM1Q13496 603 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 BOLA3Q53S33 107 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 PRRT3Q5FWE3 981 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 FIGNQ5HY92 759 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 C6orf132Q5T0Z8 1188 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 BROXQ5VW32 411 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 IGF2-ASQ6U949 168 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 RFX8Q6ZV50 586 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 SRLQ86TD4 932 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 GKN2Q86XP6 184 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 PAF1Q8N7H5 531 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 ZNF248Q8NDW4 579 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 BOCQ9BWV1 1114 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 HAUS4Q9H6D7 363 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 POLR1BQ9H9Y6 1135 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 CNOT8Q9UFF9 292 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 GGT7Q9UJ14 662 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 ATP8A1Q9Y2Q0 1164 aa13.72□□□□□ -0.21
CCHCR1-227ENST00000508852 ANKRD36A6QL64 1941 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 TMCO5BA8MYB1 307 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 H3BRJ5 948 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 TK2O00142 265 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 TEX33O43247 280 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 CSO75390 466 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 NEBLO76041 1014 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 RASGRP1O95267 797 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 SERPINC1P01008 464 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 CTSEP14091 401 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 ARL4AP40617 200 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 ZNF165P49910 485 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 PAPOLAP51003 745 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 HK3P52790 923 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 ADKP55263 362 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 AP1S1P61966 158 aa13.71□□□□□ -0.21
CCHCR1-227ENST00000508852 DEFB133Q30KQ1 61 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms